Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 SUMO2P16-201ENST00000519475 264 ntBASIC2.23□□□□□ -2.05
SLC6A11P48066 AC007012.1-201ENST00000567192 175 ntBASIC2.23□□□□□ -2.05
SLC6A11P48066 HSPE1P19-201ENST00000603327 295 ntBASIC2.23□□□□□ -2.05
SLC6A11P48066 U1.36-201ENST00000620684 176 ntBASIC2.23□□□□□ -2.05
SLC6A11P48066 MIR219B-201ENST00000637023 88 ntBASIC2.23□□□□□ -2.05
SLC6A11P48066 MIR302B-201ENST00000362188 73 ntBASIC2.22□□□□□ -2.05
SLC6A11P48066 RNA5SP450-201ENST00000411206 102 ntBASIC2.22□□□□□ -2.05
SLC6A11P48066 AC011753.1-201ENST00000451001 220 ntBASIC2.22□□□□□ -2.05
SLC6A11P48066 RNU6-830P-201ENST00000516353 107 ntBASIC2.22□□□□□ -2.05
SLC6A11P48066 IGLV3-17-201ENST00000519099 244 ntBASIC2.22□□□□□ -2.05
SLC6A11P48066 MIR4529-201ENST00000578110 78 ntBASIC2.22□□□□□ -2.05
SLC6A11P48066 AC078899.2-201ENST00000595282 212 ntBASIC2.22□□□□□ -2.05
SLC6A11P48066 SNORD3E-202ENST00000627253 216 ntBASIC2.22□□□□□ -2.05
SLC6A11P48066 MIR203B-201ENST00000636080 86 ntBASIC2.22□□□□□ -2.05
SLC6A11P48066 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.22□□□□□ -2.05
SLC6A11P48066 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
SLC6A11P48066 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-34-201ENST00000362441 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-12-201ENST00000362583 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-29-201ENST00000362834 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-9-201ENST00000362912 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-21-201ENST00000362963 81 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-14-201ENST00000363090 81 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-13-201ENST00000363358 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-41-201ENST00000363608 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-11-201ENST00000363616 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-5-201ENST00000363633 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-39-201ENST00000363694 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-4-201ENST00000363810 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-16-201ENST00000363887 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-6-201ENST00000363942 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 Y_RNA.213-201ENST00000364178 111 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-42-201ENST00000364273 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-15-201ENST00000364809 81 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-1-201ENST00000364961 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-26-201ENST00000365067 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-10-201ENST00000365073 81 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-43-201ENST00000365503 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-36-201ENST00000365629 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 RNU6-147P-201ENST00000383983 107 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 Y_RNA.494-201ENST00000384432 111 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 MIR759-201ENST00000390224 91 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 AL035398.1-201ENST00000430869 322 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 PGBD4P5-201ENST00000445958 426 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 RPS29P24-201ENST00000486345 171 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 RNU6-412P-201ENST00000516434 106 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 SNORD115-40-201ENST00000606510 82 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 uc_338.28-201ENST00000612082 187 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 AC009831.4-201ENST00000620744 325 ntBASIC2.21□□□□□ -2.06
SLC6A11P48066 RNU6-414P-201ENST00000363705 104 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 Y_RNA.298-201ENST00000364960 107 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 MIR136-201ENST00000385207 82 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 MIR660-201ENST00000385235 97 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 SNORD12C-201ENST00000386307 89 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SLC6A11P48066 RNA5SP57-201ENST00000459463 123 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 RNU7-96P-201ENST00000459535 64 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 AC107297.1-201ENST00000459991 176 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 RNU7-123P-201ENST00000515911 60 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 RNA5SP458-201ENST00000516188 119 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 SNORA31.25-201ENST00000517242 134 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.2□□□□□ -2.06
SLC6A11P48066 MIR3613-201ENST00000579844 87 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 AL513423.1-201ENST00000621695 132 ntBASIC2.2□□□□□ -2.06
SLC6A11P48066 MIR450A1-201ENST00000362262 91 ntBASIC2.19□□□□□ -2.06
SLC6A11P48066 Y_RNA.116-201ENST00000363292 103 ntBASIC2.19□□□□□ -2.06
SLC6A11P48066 Y_RNA.198-201ENST00000364013 98 ntBASIC2.19□□□□□ -2.06
SLC6A11P48066 Y_RNA.549-201ENST00000384657 102 ntBASIC2.19□□□□□ -2.06
SLC6A11P48066 AL603825.1-201ENST00000438481 80 ntBASIC2.19□□□□□ -2.06
SLC6A11P48066 AC099513.1-201ENST00000490423 301 ntBASIC2.19□□□□□ -2.06
SLC6A11P48066 RNU6-998P-201ENST00000515894 101 ntBASIC2.19□□□□□ -2.06
SLC6A11P48066 MIR4305-201ENST00000583252 102 ntBASIC2.19□□□□□ -2.06
SLC6A11P48066 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
SLC6A11P48066 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SLC6A11P48066 SNORA63.5-201ENST00000363548 123 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 SNORA1.2-201ENST00000365189 134 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 RNA5SP100-201ENST00000410903 110 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 RNA5SP59-201ENST00000410922 110 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 RNU2-11P-201ENST00000459191 187 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 AC022523.2-201ENST00000561045 150 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.18□□□□□ -2.06
SLC6A11P48066 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SLC6A11P48066 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SLC6A11P48066 RNA5SP99-201ENST00000364020 114 ntBASIC2.17□□□□□ -2.06
SLC6A11P48066 RNU6-1107P-201ENST00000364817 104 ntBASIC2.17□□□□□ -2.06
SLC6A11P48066 Y_RNA.370-201ENST00000365589 108 ntBASIC2.17□□□□□ -2.06
SLC6A11P48066 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.17□□□□□ -2.06
SLC6A11P48066 AL031737.1-201ENST00000450125 223 ntBASIC2.17□□□□□ -2.06
SLC6A11P48066 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
SLC6A11P48066 RNA5SP82-201ENST00000516707 92 ntBASIC2.17□□□□□ -2.06
SLC6A11P48066 AL035470.1-201ENST00000622571 220 ntBASIC2.17□□□□□ -2.06
SLC6A11P48066 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SLC6A11P48066 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SLC6A11P48066 Y_RNA.281-201ENST00000364774 94 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 321.2 ms