Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNU2-13P-201ENST00000515909 113 ntBASIC2.05□□□□□ -2.08
VAMP1P23763 RNU6-113P-201ENST00000516653 101 ntBASIC2.05□□□□□ -2.08
VAMP1P23763 AC024614.2-201ENST00000577584 372 ntBASIC2.05□□□□□ -2.08
VAMP1P23763 MIR3192-201ENST00000584920 77 ntBASIC2.05□□□□□ -2.08
VAMP1P23763 AC067747.1-201ENST00000608026 250 ntBASIC2.05□□□□□ -2.08
VAMP1P23763 SCARNA15.3-201ENST00000626315 122 ntBASIC2.05□□□□□ -2.08
VAMP1P23763 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.05□□□□□ -2.08
VAMP1P23763 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
VAMP1P23763 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
VAMP1P23763 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
VAMP1P23763 SNORA25.3-201ENST00000363205 127 ntBASIC2.04□□□□□ -2.08
VAMP1P23763 RNU4-16P-201ENST00000364737 141 ntBASIC2.04□□□□□ -2.08
VAMP1P23763 SNORA24-201ENST00000384096 131 ntBASIC2.04□□□□□ -2.08
VAMP1P23763 AC019129.1-201ENST00000403786 261 ntBASIC2.04□□□□□ -2.08
VAMP1P23763 RNU6-257P-201ENST00000410238 98 ntBASIC2.04□□□□□ -2.08
VAMP1P23763 MTND4LP9-201ENST00000427694 174 ntBASIC2.04□□□□□ -2.08
VAMP1P23763 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
VAMP1P23763 MIR21-201ENST00000362134 72 ntBASIC2.03□□□□□ -2.08
VAMP1P23763 MIR103A2-201ENST00000362154 78 ntBASIC2.03□□□□□ -2.08
VAMP1P23763 RNA5SP456-201ENST00000364002 114 ntBASIC2.03□□□□□ -2.08
VAMP1P23763 NDUFB4P4-201ENST00000404822 243 ntBASIC2.03□□□□□ -2.08
VAMP1P23763 RNU6-893P-201ENST00000458841 100 ntBASIC2.03□□□□□ -2.08
VAMP1P23763 RNA5SP236-201ENST00000516169 116 ntBASIC2.03□□□□□ -2.08
VAMP1P23763 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.03□□□□□ -2.08
VAMP1P23763 MIR4513-201ENST00000581077 86 ntBASIC2.03□□□□□ -2.08
VAMP1P23763 AC245047.7-201ENST00000440265 293 ntBASIC2.02□□□□□ -2.09
VAMP1P23763 AC009474.2-201ENST00000451383 136 ntBASIC2.02□□□□□ -2.09
VAMP1P23763 AC133485.4-201ENST00000561835 220 ntBASIC2.02□□□□□ -2.09
VAMP1P23763 AC138907.4-201ENST00000570107 226 ntBASIC2.02□□□□□ -2.09
VAMP1P23763 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.02□□□□□ -2.09
VAMP1P23763 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VAMP1P23763 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.01□□□□□ -2.09
VAMP1P23763 MIR208A-201ENST00000362287 71 ntBASIC2.01□□□□□ -2.09
VAMP1P23763 RNVU1-14-201ENST00000384770 164 ntBASIC2.01□□□□□ -2.09
VAMP1P23763 RNU6-240P-201ENST00000516098 97 ntBASIC2.01□□□□□ -2.09
VAMP1P23763 RNU6-789P-201ENST00000517105 102 ntBASIC2.01□□□□□ -2.09
VAMP1P23763 RNU2-60P-201ENST00000517290 128 ntBASIC2.01□□□□□ -2.09
VAMP1P23763 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
VAMP1P23763 RNU6-647P-201ENST00000364243 107 ntBASIC2□□□□□ -2.09
VAMP1P23763 Y_RNA.354-201ENST00000365448 111 ntBASIC2□□□□□ -2.09
VAMP1P23763 MIR9-1-201ENST00000385198 89 ntBASIC2□□□□□ -2.09
VAMP1P23763 SNORA31.4-201ENST00000516049 129 ntBASIC2□□□□□ -2.09
VAMP1P23763 RNA5SP341-201ENST00000516261 117 ntBASIC2□□□□□ -2.09
VAMP1P23763 MIR548AO-201ENST00000579992 96 ntBASIC2□□□□□ -2.09
VAMP1P23763 U4.3-201ENST00000621047 82 ntBASIC2□□□□□ -2.09
VAMP1P23763 AC021613.1-201ENST00000623880 111 ntBASIC2□□□□□ -2.09
VAMP1P23763 RNU6-396P-201ENST00000365369 105 ntBASIC1.99□□□□□ -2.09
VAMP1P23763 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
VAMP1P23763 RNU6-913P-201ENST00000390913 95 ntBASIC1.99□□□□□ -2.09
VAMP1P23763 Y_RNA.586-201ENST00000391146 98 ntBASIC1.99□□□□□ -2.09
VAMP1P23763 RNA5SP425-201ENST00000410336 112 ntBASIC1.99□□□□□ -2.09
VAMP1P23763 RPS3AP1-201ENST00000413190 320 ntBASIC1.99□□□□□ -2.09
VAMP1P23763 RNU7-45P-201ENST00000459460 63 ntBASIC1.99□□□□□ -2.09
VAMP1P23763 RNU6-970P-201ENST00000516312 107 ntBASIC1.99□□□□□ -2.09
VAMP1P23763 AC079600.2-201ENST00000550076 130 ntBASIC1.99□□□□□ -2.09
VAMP1P23763 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
VAMP1P23763 Y_RNA.114-201ENST00000363265 113 ntBASIC1.98□□□□□ -2.09
VAMP1P23763 SNORD38B-201ENST00000384690 67 ntBASIC1.98□□□□□ -2.09
VAMP1P23763 AL022718.1-201ENST00000412004 84 ntBASIC1.98□□□□□ -2.09
VAMP1P23763 SNORA31.2-201ENST00000516019 134 ntBASIC1.98□□□□□ -2.09
VAMP1P23763 MIR3121-201ENST00000579680 77 ntBASIC1.98□□□□□ -2.09
VAMP1P23763 AC021443.1-201ENST00000604478 211 ntBASIC1.98□□□□□ -2.09
VAMP1P23763 AL020996.3-201ENST00000606617 222 ntBASIC1.98□□□□□ -2.09
VAMP1P23763 SNORD38B-202ENST00000625943 69 ntBASIC1.98□□□□□ -2.09
VAMP1P23763 AC132825.6-201ENST00000638861 357 ntBASIC1.98□□□□□ -2.09
VAMP1P23763 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VAMP1P23763 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
VAMP1P23763 RNA5SP264-201ENST00000363115 107 ntBASIC1.97□□□□□ -2.09
VAMP1P23763 Y_RNA.294-201ENST00000364916 102 ntBASIC1.97□□□□□ -2.09
VAMP1P23763 MIR222-201ENST00000384992 110 ntBASIC1.97□□□□□ -2.09
VAMP1P23763 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.97□□□□□ -2.09
VAMP1P23763 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.97□□□□□ -2.09
VAMP1P23763 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.97□□□□□ -2.09
VAMP1P23763 RNU6-971P-201ENST00000516920 106 ntBASIC1.97□□□□□ -2.09
VAMP1P23763 RNU6-165P-201ENST00000517170 99 ntBASIC1.97□□□□□ -2.09
VAMP1P23763 IGKV3-31-201ENST00000523109 329 ntBASIC1.97□□□□□ -2.09
VAMP1P23763 AP000753.3-201ENST00000604083 169 ntBASIC1.97□□□□□ -2.09
VAMP1P23763 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
VAMP1P23763 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VAMP1P23763 RNU6-859P-201ENST00000362728 107 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 RNU6-508P-201ENST00000363231 103 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 RNU6-1319P-201ENST00000390855 104 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 RNU6-747P-201ENST00000390928 104 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 RNU6-241P-201ENST00000391148 104 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 RNU6-177P-201ENST00000411257 104 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 HMGN1P33-201ENST00000432945 451 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 AC048334.1-201ENST00000477975 159 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 MIR2115-201ENST00000516657 100 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 MIR3910-1-201ENST00000580936 111 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 MIR4325-201ENST00000583049 90 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 AL137067.1-201ENST00000615933 120 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 MIR6717-201ENST00000622747 73 ntBASIC1.96□□□□□ -2.1
VAMP1P23763 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VAMP1P23763 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
VAMP1P23763 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VAMP1P23763 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VAMP1P23763 Y_RNA.330-201ENST00000365230 109 ntBASIC1.95□□□□□ -2.1
VAMP1P23763 BX510359.1-201ENST00000456973 237 ntBASIC1.95□□□□□ -2.1
VAMP1P23763 RNU6-1061P-201ENST00000516530 99 ntBASIC1.95□□□□□ -2.1
VAMP1P23763 HSPE1P19-201ENST00000603327 295 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms