Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SPDEFO95238 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPDEFO95238 Y_RNA.494-201ENST00000384432 111 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 MIR516B2-201ENST00000385190 85 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 U8.17-201ENST00000391292 132 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 MIR1267-201ENST00000408723 78 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.88□□□□□ -2.11
SPDEFO95238 PGBD4P5-201ENST00000445958 426 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 AC093850.1-201ENST00000454121 251 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 AC026436.1-201ENST00000510537 270 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 RNY4P20-201ENST00000516678 93 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 RNU7-181P-201ENST00000517234 74 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 AC090821.2-201ENST00000523552 176 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 AL596211.1-201ENST00000569873 2277 ntBASIC1.88□□□□□ -2.11
SPDEFO95238 MIR136-201ENST00000385207 82 ntBASIC1.87□□□□□ -2.11
SPDEFO95238 RNU7-96P-201ENST00000459535 64 ntBASIC1.87□□□□□ -2.11
SPDEFO95238 AC008413.1-201ENST00000511864 177 ntBASIC1.87□□□□□ -2.11
SPDEFO95238 RNU6-998P-201ENST00000515894 101 ntBASIC1.87□□□□□ -2.11
SPDEFO95238 MIR4778-201ENST00000577635 80 ntBASIC1.87□□□□□ -2.11
SPDEFO95238 AC021443.1-201ENST00000604478 211 ntBASIC1.87□□□□□ -2.11
SPDEFO95238 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
SPDEFO95238 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
SPDEFO95238 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SPDEFO95238 MIR342-201ENST00000362212 99 ntBASIC1.86□□□□□ -2.11
SPDEFO95238 MIR424-201ENST00000362227 98 ntBASIC1.86□□□□□ -2.11
SPDEFO95238 Y_RNA.198-201ENST00000364013 98 ntBASIC1.86□□□□□ -2.11
SPDEFO95238 SNX2P2-201ENST00000424553 323 ntBASIC1.86□□□□□ -2.11
SPDEFO95238 RPS29P24-201ENST00000486345 171 ntBASIC1.86□□□□□ -2.11
SPDEFO95238 SNORA31.17-201ENST00000516953 127 ntBASIC1.86□□□□□ -2.11
SPDEFO95238 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
SPDEFO95238 MIR6766-201ENST00000622641 72 ntBASIC1.86□□□□□ -2.11
SPDEFO95238 SNORD3E-202ENST00000627253 216 ntBASIC1.86□□□□□ -2.11
SPDEFO95238 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SPDEFO95238 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.86□□□□□ -2.11
SPDEFO95238 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.85□□□□□ -2.11
SPDEFO95238 Y_RNA.281-201ENST00000364774 94 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 Y_RNA.298-201ENST00000364960 107 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 SNORA1.2-201ENST00000365189 134 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 MIR526A1-201ENST00000384897 85 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 AL035398.1-201ENST00000430869 322 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 AC025033.1-201ENST00000463883 194 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.85□□□□□ -2.11
SPDEFO95238 SNORA31.4-201ENST00000516049 129 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.85□□□□□ -2.11
SPDEFO95238 AC007012.1-201ENST00000567192 175 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 MIR3683-201ENST00000580847 82 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 MIR4305-201ENST00000583252 102 ntBASIC1.85□□□□□ -2.11
SPDEFO95238 Y_RNA.213-201ENST00000364178 111 ntBASIC1.84□□□□□ -2.11
SPDEFO95238 RNU6-360P-201ENST00000390944 104 ntBASIC1.84□□□□□ -2.11
SPDEFO95238 RNU7-164P-201ENST00000459221 62 ntBASIC1.84□□□□□ -2.11
SPDEFO95238 AC107297.1-201ENST00000459991 176 ntBASIC1.84□□□□□ -2.11
SPDEFO95238 SUMO2P16-201ENST00000519475 264 ntBASIC1.84□□□□□ -2.11
SPDEFO95238 HSPE1P19-201ENST00000603327 295 ntBASIC1.84□□□□□ -2.11
SPDEFO95238 RNU4-16P-201ENST00000364737 141 ntBASIC1.83□□□□□ -2.12
SPDEFO95238 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
SPDEFO95238 Y_RNA.370-201ENST00000365589 108 ntBASIC1.83□□□□□ -2.12
SPDEFO95238 RNU6-147P-201ENST00000383983 107 ntBASIC1.83□□□□□ -2.12
SPDEFO95238 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.83□□□□□ -2.12
SPDEFO95238 RNU7-123P-201ENST00000515911 60 ntBASIC1.83□□□□□ -2.12
SPDEFO95238 RNU6-412P-201ENST00000516434 106 ntBASIC1.83□□□□□ -2.12
SPDEFO95238 MIR6132-201ENST00000622083 109 ntBASIC1.83□□□□□ -2.12
SPDEFO95238 MIR302B-201ENST00000362188 73 ntBASIC1.82□□□□□ -2.12
SPDEFO95238 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
SPDEFO95238 RNU2-11P-201ENST00000459191 187 ntBASIC1.82□□□□□ -2.12
SPDEFO95238 SNORD123-201ENST00000459473 70 ntBASIC1.82□□□□□ -2.12
SPDEFO95238 RNU2-13P-201ENST00000515909 113 ntBASIC1.82□□□□□ -2.12
SPDEFO95238 RNU2-35P-201ENST00000516446 142 ntBASIC1.82□□□□□ -2.12
SPDEFO95238 MIR4679-2-201ENST00000578358 77 ntBASIC1.82□□□□□ -2.12
SPDEFO95238 MIR3613-201ENST00000579844 87 ntBASIC1.82□□□□□ -2.12
SPDEFO95238 MIR3935-201ENST00000583472 104 ntBASIC1.82□□□□□ -2.12
SPDEFO95238 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SPDEFO95238 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SPDEFO95238 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
SPDEFO95238 RNU6-1123P-201ENST00000362347 106 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 Y_RNA.85-201ENST00000363014 111 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 SNORA24-201ENST00000384096 131 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 SNORA70.7-201ENST00000384159 133 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 Y_RNA.510-201ENST00000384511 114 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 MIR634-201ENST00000385208 97 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 SNORD12C-201ENST00000386307 89 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 MT-TI-201ENST00000387365 69 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SPDEFO95238 SNORA48.3-201ENST00000391081 134 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 UBL5P3-201ENST00000475112 231 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.81□□□□□ -2.12
SPDEFO95238 AC046143.2-201ENST00000609789 160 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 AC009831.4-201ENST00000620744 325 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 AC021613.1-201ENST00000623880 111 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 AC092881.1-201ENST00000638218 2733 ntBASIC1.81□□□□□ -2.12
SPDEFO95238 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SPDEFO95238 Y_RNA.116-201ENST00000363292 103 ntBASIC1.8□□□□□ -2.12
SPDEFO95238 RNY4P6-201ENST00000363667 96 ntBASIC1.8□□□□□ -2.12
SPDEFO95238 RNU6-457P-201ENST00000363999 107 ntBASIC1.8□□□□□ -2.12
SPDEFO95238 RNU6-1107P-201ENST00000364817 104 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 247.9 ms