Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 AC022523.2-201ENST00000561045 150 ntBASIC2.2□□□□□ -2.06
NPHS1O60500 MIR3613-201ENST00000579844 87 ntBASIC2.2□□□□□ -2.06
NPHS1O60500 AC009831.4-201ENST00000620744 325 ntBASIC2.2□□□□□ -2.06
NPHS1O60500 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.2□□□□□ -2.06
NPHS1O60500 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NPHS1O60500 MIR302B-201ENST00000362188 73 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 Y_RNA.281-201ENST00000364774 94 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 SNORA1.2-201ENST00000365189 134 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 SNORD28B-201ENST00000390993 75 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 AL035398.1-201ENST00000430869 322 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 SNORD123-201ENST00000459473 70 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 AC107297.1-201ENST00000459991 176 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 MIR548AR-201ENST00000582191 57 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 uc_338.28-201ENST00000612082 187 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 AL035470.1-201ENST00000622571 220 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.19□□□□□ -2.06
NPHS1O60500 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
NPHS1O60500 ZNF658B-202ENST00000615961 3375 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 RNA5SP276-201ENST00000362580 94 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 RNU6-203P-201ENST00000384038 104 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 SNORD12C-201ENST00000386307 89 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 RNU6-360P-201ENST00000390944 104 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 RNU7-45P-201ENST00000459460 63 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 RNA5SP57-201ENST00000459463 123 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 MIR3683-201ENST00000580847 82 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 MIR3162-201ENST00000581818 82 ntBASIC2.18□□□□□ -2.06
NPHS1O60500 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
NPHS1O60500 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
NPHS1O60500 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
NPHS1O60500 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NPHS1O60500 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NPHS1O60500 AC092881.1-201ENST00000638218 2733 ntBASIC2.17□□□□□ -2.06
NPHS1O60500 Y_RNA.116-201ENST00000363292 103 ntBASIC2.17□□□□□ -2.06
NPHS1O60500 RNU6-414P-201ENST00000363705 104 ntBASIC2.17□□□□□ -2.06
NPHS1O60500 Y_RNA.213-201ENST00000364178 111 ntBASIC2.17□□□□□ -2.06
NPHS1O60500 RNU6-1107P-201ENST00000364817 104 ntBASIC2.17□□□□□ -2.06
NPHS1O60500 RN7SKP192-201ENST00000411291 327 ntBASIC2.17□□□□□ -2.06
NPHS1O60500 UBL5P3-201ENST00000475112 231 ntBASIC2.17□□□□□ -2.06
NPHS1O60500 RNU6-412P-201ENST00000516434 106 ntBASIC2.17□□□□□ -2.06
NPHS1O60500 FAM106DP-201ENST00000586416 501 ntBASIC2.17□□□□□ -2.06
NPHS1O60500 Y_RNA.85-201ENST00000363014 111 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 SNORA67.4-201ENST00000384688 142 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 RNA5SP144-201ENST00000410846 116 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 RNU7-67P-201ENST00000459003 62 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.16□□□□□ -2.06
NPHS1O60500 RNU6-958P-201ENST00000516995 106 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 MIR4287-201ENST00000579398 78 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 MIR5002-201ENST00000584713 97 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 AC106754.2-201ENST00000623006 233 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 AC021613.1-201ENST00000623880 111 ntBASIC2.16□□□□□ -2.06
NPHS1O60500 MIR450A1-201ENST00000362262 91 ntBASIC2.15□□□□□ -2.07
NPHS1O60500 SNORA63.5-201ENST00000363548 123 ntBASIC2.15□□□□□ -2.07
NPHS1O60500 RNY4P6-201ENST00000363667 96 ntBASIC2.15□□□□□ -2.07
NPHS1O60500 RNU6-106P-201ENST00000384405 107 ntBASIC2.15□□□□□ -2.07
NPHS1O60500 MIR759-201ENST00000390224 91 ntBASIC2.15□□□□□ -2.07
NPHS1O60500 RNU2-13P-201ENST00000515909 113 ntBASIC2.15□□□□□ -2.07
NPHS1O60500 RNA5SP200-201ENST00000516360 103 ntBASIC2.15□□□□□ -2.07
NPHS1O60500 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.15□□□□□ -2.07
NPHS1O60500 MIR4679-2-201ENST00000578358 77 ntBASIC2.15□□□□□ -2.07
NPHS1O60500 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.15□□□□□ -2.07
NPHS1O60500 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.15□□□□□ -2.07
NPHS1O60500 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NPHS1O60500 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
NPHS1O60500 Y_RNA.362-201ENST00000365518 110 ntBASIC2.14□□□□□ -2.07
NPHS1O60500 MIR17-201ENST00000385012 84 ntBASIC2.14□□□□□ -2.07
NPHS1O60500 RPS29P29-201ENST00000456396 171 ntBASIC2.14□□□□□ -2.07
NPHS1O60500 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.14□□□□□ -2.07
NPHS1O60500 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.14□□□□□ -2.07
NPHS1O60500 RNU6-1123P-201ENST00000362347 106 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 SNORA24-201ENST00000384096 131 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 SNORA70.7-201ENST00000384159 133 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 Y_RNA.510-201ENST00000384511 114 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 MIR194-1-201ENST00000384892 85 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 MIR221-201ENST00000385135 110 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 RNU6-554P-201ENST00000410466 106 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 POLR2J4-204ENST00000418424 324 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 AL512326.2-201ENST00000426359 151 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 RNU6-917P-201ENST00000516294 104 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.13□□□□□ -2.07
NPHS1O60500 MIR4791-201ENST00000607666 84 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 AC243994.1-201ENST00000618627 109 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 AC095038.3-201ENST00000634439 195 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
NPHS1O60500 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
NPHS1O60500 AP000648.3-201ENST00000623539 4507 ntBASIC2.13□□□□□ -2.07
NPHS1O60500 AL589743.1-201ENST00000551932 2712 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 RNU6-1190P-201ENST00000410811 104 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 AL022718.1-201ENST00000412004 84 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 AL031737.1-201ENST00000450125 223 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 RNU6-717P-201ENST00000459076 104 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 SNORA59A-201ENST00000459326 152 ntBASIC2.12□□□□□ -2.07
NPHS1O60500 AC025033.1-201ENST00000463883 194 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms