Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.08□□□□□ -2.24
TO15178 AC087499.4-201ENST00000448505 178 ntBASIC1.08□□□□□ -2.24
TO15178 SNRPGP8-201ENST00000454064 226 ntBASIC1.08□□□□□ -2.24
TO15178 RNU4-71P-201ENST00000516258 113 ntBASIC1.08□□□□□ -2.24
TO15178 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
TO15178 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.08□□□□□ -2.24
TO15178 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
TO15178 Y_RNA.634-201ENST00000364811 113 ntBASIC1.07□□□□□ -2.24
TO15178 RNU6-392P-201ENST00000364926 101 ntBASIC1.07□□□□□ -2.24
TO15178 Y_RNA.327-201ENST00000365201 102 ntBASIC1.07□□□□□ -2.24
TO15178 RNU6-728P-201ENST00000365375 104 ntBASIC1.07□□□□□ -2.24
TO15178 RNU6-484P-201ENST00000384016 107 ntBASIC1.07□□□□□ -2.24
TO15178 Y_RNA.447-201ENST00000384184 113 ntBASIC1.07□□□□□ -2.24
TO15178 SNORD61-201ENST00000384252 73 ntBASIC1.07□□□□□ -2.24
TO15178 RNU6-574P-201ENST00000384265 107 ntBASIC1.07□□□□□ -2.24
TO15178 SNORA51.10-201ENST00000384418 136 ntBASIC1.07□□□□□ -2.24
TO15178 MIR1287-201ENST00000408492 90 ntBASIC1.07□□□□□ -2.24
TO15178 AP003716.2-201ENST00000528260 108 ntBASIC1.07□□□□□ -2.24
TO15178 AC109810.1-201ENST00000534066 224 ntBASIC1.07□□□□□ -2.24
TO15178 MIR4781-201ENST00000585250 76 ntBASIC1.07□□□□□ -2.24
TO15178 AC012676.2-201ENST00000619258 186 ntBASIC1.07□□□□□ -2.24
TO15178 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.06□□□□□ -2.24
TO15178 RNU6-888P-201ENST00000363010 101 ntBASIC1.06□□□□□ -2.24
TO15178 SNORA25.3-201ENST00000363205 127 ntBASIC1.06□□□□□ -2.24
TO15178 Y_RNA.307-201ENST00000365022 117 ntBASIC1.06□□□□□ -2.24
TO15178 Y_RNA.308-201ENST00000365043 101 ntBASIC1.06□□□□□ -2.24
TO15178 SNORA79-201ENST00000408376 140 ntBASIC1.06□□□□□ -2.24
TO15178 AC063976.4-201ENST00000421971 163 ntBASIC1.06□□□□□ -2.24
TO15178 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.06□□□□□ -2.24
TO15178 RNU11-2P-201ENST00000516898 142 ntBASIC1.06□□□□□ -2.24
TO15178 AC007751.1-201ENST00000529260 376 ntBASIC1.06□□□□□ -2.24
TO15178 HSPE1P19-201ENST00000603327 295 ntBASIC1.06□□□□□ -2.24
TO15178 MIR4791-201ENST00000607666 84 ntBASIC1.06□□□□□ -2.24
TO15178 AC134878.1-201ENST00000619901 243 ntBASIC1.06□□□□□ -2.24
TO15178 SNORD115-34-201ENST00000362441 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-12-201ENST00000362583 82 ntBASIC1.05□□□□□ -2.24
TO15178 Y_RNA.60-201ENST00000362831 98 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-29-201ENST00000362834 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-9-201ENST00000362912 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-21-201ENST00000362963 81 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-14-201ENST00000363090 81 ntBASIC1.05□□□□□ -2.24
TO15178 RNY1P10-201ENST00000363268 113 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-13-201ENST00000363358 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-41-201ENST00000363608 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-11-201ENST00000363616 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-5-201ENST00000363633 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-39-201ENST00000363694 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-4-201ENST00000363810 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD45.3-201ENST00000363836 72 ntBASIC1.05□□□□□ -2.24
TO15178 RNU1-124P-201ENST00000363861 145 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-16-201ENST00000363887 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-6-201ENST00000363942 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-42-201ENST00000364273 82 ntBASIC1.05□□□□□ -2.24
TO15178 Y_RNA.226-201ENST00000364337 114 ntBASIC1.05□□□□□ -2.24
TO15178 Y_RNA.241-201ENST00000364470 117 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-15-201ENST00000364809 81 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-1-201ENST00000364961 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-26-201ENST00000365067 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-10-201ENST00000365073 81 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-43-201ENST00000365503 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-36-201ENST00000365629 82 ntBASIC1.05□□□□□ -2.24
TO15178 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
TO15178 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
TO15178 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
TO15178 MIR570-201ENST00000384917 97 ntBASIC1.05□□□□□ -2.24
TO15178 RNU7-90P-201ENST00000459216 62 ntBASIC1.05□□□□□ -2.24
TO15178 RNU7-21P-201ENST00000459430 62 ntBASIC1.05□□□□□ -2.24
TO15178 RPS26P48-201ENST00000491713 339 ntBASIC1.05□□□□□ -2.24
TO15178 AC005840.1-201ENST00000498412 377 ntBASIC1.05□□□□□ -2.24
TO15178 UBL5P1-201ENST00000507979 193 ntBASIC1.05□□□□□ -2.24
TO15178 TRMT112P2-201ENST00000512910 132 ntBASIC1.05□□□□□ -2.24
TO15178 RNU2-13P-201ENST00000515909 113 ntBASIC1.05□□□□□ -2.24
TO15178 Y_RNA.680-201ENST00000516441 93 ntBASIC1.05□□□□□ -2.24
TO15178 MIR4744-201ENST00000581563 82 ntBASIC1.05□□□□□ -2.24
TO15178 AC097639.2-201ENST00000603159 172 ntBASIC1.05□□□□□ -2.24
TO15178 SNORD115-40-201ENST00000606510 82 ntBASIC1.05□□□□□ -2.24
TO15178 AC243994.1-201ENST00000618627 109 ntBASIC1.05□□□□□ -2.24
TO15178 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
TO15178 Y_RNA.7-201ENST00000362352 102 ntBASIC1.04□□□□□ -2.24
TO15178 Y_RNA.37-201ENST00000362606 108 ntBASIC1.04□□□□□ -2.24
TO15178 Y_RNA.66-201ENST00000362862 102 ntBASIC1.04□□□□□ -2.24
TO15178 Y_RNA.91-201ENST00000363042 107 ntBASIC1.04□□□□□ -2.24
TO15178 MIR518F-201ENST00000384973 87 ntBASIC1.04□□□□□ -2.24
TO15178 SNORA40.5-201ENST00000391061 128 ntBASIC1.04□□□□□ -2.24
TO15178 Y_RNA.626-201ENST00000411288 95 ntBASIC1.04□□□□□ -2.24
TO15178 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
TO15178 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
TO15178 RNY3P16-201ENST00000516338 101 ntBASIC1.04□□□□□ -2.24
TO15178 RNU6-197P-201ENST00000516680 100 ntBASIC1.04□□□□□ -2.24
TO15178 RNU6-1270P-201ENST00000517128 108 ntBASIC1.04□□□□□ -2.24
TO15178 SEPT14P17-201ENST00000617978 177 ntBASIC1.04□□□□□ -2.24
TO15178 MIR7111-201ENST00000619751 72 ntBASIC1.04□□□□□ -2.24
TO15178 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.03□□□□□ -2.24
TO15178 Y_RNA.489-201ENST00000384410 101 ntBASIC1.03□□□□□ -2.24
TO15178 MIR548A2-201ENST00000384956 97 ntBASIC1.03□□□□□ -2.24
TO15178 SNORA75.2-201ENST00000391138 150 ntBASIC1.03□□□□□ -2.24
TO15178 SNORA75.3-201ENST00000391231 150 ntBASIC1.03□□□□□ -2.24
TO15178 RNU6-493P-201ENST00000391321 108 ntBASIC1.03□□□□□ -2.24
TO15178 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
TO15178 MIR1185-1-201ENST00000408598 86 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms