Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MTND1P7-201ENST00000632801 297 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
NKX2-6A6NCS4 UBE2WP1-201ENST00000362030 340 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 RNU1-36P-201ENST00000365130 165 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 RNU6-1160P-201ENST00000384546 104 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 RNU6-713P-201ENST00000384761 107 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 AC023449.1-201ENST00000454464 154 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 RNU6-453P-201ENST00000516819 85 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 MIR4653-201ENST00000585107 83 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 Y_RNA.802-201ENST00000614892 130 ntBASIC0.66□□□□□ -2.3
NKX2-6A6NCS4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.44-201ENST00000362676 108 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.229-201ENST00000364347 113 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.396-201ENST00000383949 103 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.461-201ENST00000384263 103 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 SNORA51.10-201ENST00000384418 136 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 MIR193B-201ENST00000384907 83 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 MIR605-201ENST00000385078 83 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 RNA5SP496-201ENST00000391240 109 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 AL392103.1-201ENST00000447000 198 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 MTND4LP30-201ENST00000454092 297 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 RNU6-1007P-201ENST00000516586 107 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 AC036111.3-201ENST00000526389 112 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 MIR4643-201ENST00000577473 78 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 AC006504.6-201ENST00000590142 199 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
NKX2-6A6NCS4 RNA5SP48-201ENST00000363969 126 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 SNORD61-201ENST00000384252 73 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 MIR626-201ENST00000385032 94 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 MIR936-201ENST00000401264 98 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.622-201ENST00000411091 108 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 AC090844.1-201ENST00000422019 156 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 SCARNA8-201ENST00000515924 131 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 RNU6-693P-201ENST00000516134 107 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 SNORD77.4-201ENST00000516158 81 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 RNU6-1270P-201ENST00000517128 108 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.812-201ENST00000610788 101 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.784-201ENST00000613803 101 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.787-201ENST00000616522 101 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.780-201ENST00000617336 101 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 AC243994.1-201ENST00000618627 109 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.801-201ENST00000619005 101 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 MIR8062-201ENST00000621515 85 ntBASIC0.64□□□□□ -2.31
NKX2-6A6NCS4 SNORA63-201ENST00000363450 132 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 snoU2_19.4-201ENST00000364329 80 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.241-201ENST00000364470 117 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 RNU6-1138P-201ENST00000365359 106 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.416-201ENST00000384014 113 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.422-201ENST00000384054 114 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.459-201ENST00000384251 102 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 RNU6-472P-201ENST00000384299 107 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 SNORA2B-201ENST00000384583 137 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 SNORA8.3-201ENST00000384679 139 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.574-201ENST00000384766 95 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 MIR526A2-201ENST00000390198 65 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 SNORD89-201ENST00000390981 114 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 RNU6-1228P-201ENST00000391014 107 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 MIR1302-6-201ENST00000408466 90 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 RNU6-938P-201ENST00000411285 103 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 AC015818.7-201ENST00000428754 109 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 AC087499.7-201ENST00000441958 109 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 snoU13.21-201ENST00000459368 105 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 AL442663.2-201ENST00000554385 511 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
NKX2-6A6NCS4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.54-201ENST00000362766 105 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.91-201ENST00000363042 107 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 SNORD114-23-201ENST00000363536 72 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.277-201ENST00000364754 102 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 MIR548A2-201ENST00000384956 97 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 MIR518F-201ENST00000384973 87 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 RNU6-205P-201ENST00000390858 107 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 MIR548F4-201ENST00000408515 105 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 Y_RNA.590-201ENST00000410140 107 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 RPS3AP1-201ENST00000413190 320 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 AL035398.1-201ENST00000430869 322 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 RNU6-197P-201ENST00000516680 100 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 SNORD36C-201ENST00000516733 66 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 RNU6-958P-201ENST00000516995 106 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 AC100767.1-201ENST00000528178 123 ntBASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.62□□□□□ -2.31
NKX2-6A6NCS4 MIR1273G-201ENST00000577677 100 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms