Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC099654.12-201ENST00000639868 649 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 SNORD115-25-201ENST00000362619 82 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 SNORA72-201ENST00000384339 132 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 RNU6-550P-201ENST00000391057 101 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 SNORD77.3-201ENST00000391113 65 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 MIR5188-201ENST00000583467 113 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 JPX_2.1-201ENST00000614161 69 ntBASIC-1.88□□□□□ -2.71
SCN11AQ9UI33 RNU6-454P-201ENST00000364292 107 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 RNU6-715P-201ENST00000365204 103 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 SNORA27-201ENST00000384323 126 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 AC104576.1-201ENST00000524225 88 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 PIGPP4-201ENST00000584447 307 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 AC008507.2-201ENST00000588402 1176 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 AC026741.1-201ENST00000605892 482 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 snoR1.1-201ENST00000628177 80 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 AC007671.2-201ENST00000637344 619 ntBASIC-1.89□□□□□ -2.71
SCN11AQ9UI33 RNU6-207P-201ENST00000384137 107 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 SNORD115.1-201ENST00000391109 76 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 MIR889-201ENST00000401280 79 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 MTCYBP36-201ENST00000404146 440 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 RNU6-325P-201ENST00000411132 105 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 AC141846.1-201ENST00000568348 142 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 AC002044.1-201ENST00000606707 158 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 AC097460.3-201ENST00000623099 442 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 RNU6-476P-201ENST00000384726 107 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 RNY4P36-201ENST00000391116 96 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 AC091179.3-201ENST00000474761 144 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 RPL39P5-202ENST00000512505 151 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 RNU6-732P-201ENST00000516033 103 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 MTCO3P23-201ENST00000561363 289 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 UBL5P4-201ENST00000562584 236 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 AC008507.4-201ENST00000585464 127 ntBASIC-1.9□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 SNORA69-201ENST00000383895 132 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 RNU6-456P-201ENST00000384493 107 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 MIR519E-201ENST00000385075 84 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 SNORD70.1-201ENST00000391007 85 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 RNU2-14P-201ENST00000411053 191 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 RNU7-138P-201ENST00000459479 64 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 MTND5P40-201ENST00000559945 246 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 RNU6-85P-201ENST00000605989 107 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 AC091931.1-201ENST00000623488 728 ntBASIC-1.91□□□□□ -2.72
SCN11AQ9UI33 RNU6-266P-201ENST00000364225 107 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 RNU6-281P-201ENST00000384212 103 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 MIR626-201ENST00000385032 94 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 SNORA26.6-201ENST00000391256 115 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 MIR450B-201ENST00000401182 78 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 RNU6-757P-201ENST00000410334 100 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 AC084290.1-201ENST00000434995 374 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 RNU6-1102P-201ENST00000516149 96 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 MIR548AE1-201ENST00000583292 70 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 AC072046.2-201ENST00000618366 268 ntBASIC-1.92□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 RNU6-429P-201ENST00000384582 108 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 SNORA49-201ENST00000386157 136 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 SCOCP1-201ENST00000554676 349 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 AC007012.1-201ENST00000567192 175 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 AC055872.1-201ENST00000570978 278 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 RN7SKP299-201ENST00000606679 301 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 U6.114-201ENST00000636407 96 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 RNY1P13-201ENST00000365030 105 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 SNORD73A-201ENST00000386062 65 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 RNU2-69P-201ENST00000516061 100 ntBASIC-1.93□□□□□ -2.72
SCN11AQ9UI33 RNU6-653P-201ENST00000363074 106 ntBASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 RNU6-226P-201ENST00000363778 107 ntBASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 RNU7-134P-201ENST00000458997 64 ntBASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 MTCO3P42-201ENST00000509488 518 ntBASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 MTCO3P39-201ENST00000514812 518 ntBASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 RNU6-983P-201ENST00000516004 103 ntBASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 AC080013.3-201ENST00000606839 578 ntBASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 AC019226.2-201ENST00000625973 424 ntBASIC-1.94□□□□□ -2.72
SCN11AQ9UI33 RNA5SP133-201ENST00000363368 119 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 MIR548H1-201ENST00000408610 102 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 RNU7-13P-201ENST00000516413 62 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 MIR4307-201ENST00000582802 84 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 AL138960.2-201ENST00000625145 535 ntBASIC-1.95□□□□□ -2.72
SCN11AQ9UI33 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 265.1 ms