Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SNORD115-10-201ENST00000365073 81 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 RNU6-302P-201ENST00000365249 107 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 RNA5SP128-201ENST00000365305 116 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-43-201ENST00000365503 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-36-201ENST00000365629 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 Y_RNA.554-201ENST00000384672 102 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 MIR760-201ENST00000390220 80 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 RNU6-510P-201ENST00000391239 108 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 MIR548O-201ENST00000408583 114 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORA36B-201ENST00000410438 131 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 FCF1P9-201ENST00000412546 282 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SUMO1P3-201ENST00000439961 304 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 MTND1P29-201ENST00000448112 647 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 RNU7-73P-201ENST00000458743 63 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD11-201ENST00000459124 84 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 RPS29P25-201ENST00000481709 171 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 RNU6-1213P-201ENST00000517075 94 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 AC144568.1-201ENST00000520139 137 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 SNORD115-40-201ENST00000606510 82 ntBASIC-0.29□□□□□ -2.46
VAPAQ9P0L0 RNU4-50P-201ENST00000364361 141 ntBASIC-0.3□□□□□ -2.46
VAPAQ9P0L0 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.3□□□□□ -2.46
VAPAQ9P0L0 MT-TF-201ENST00000387314 71 ntBASIC-0.3□□□□□ -2.46
VAPAQ9P0L0 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.3□□□□□ -2.46
VAPAQ9P0L0 RNU6-264P-201ENST00000517134 104 ntBASIC-0.3□□□□□ -2.46
VAPAQ9P0L0 AL670379.3-201ENST00000605040 251 ntBASIC-0.3□□□□□ -2.46
VAPAQ9P0L0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.3□□□□□ -2.46
VAPAQ9P0L0 AL109933.3-201ENST00000619095 188 ntBASIC-0.3□□□□□ -2.46
VAPAQ9P0L0 MIR30D-201ENST00000362283 70 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 RNU6-674P-201ENST00000363831 107 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 SNORA1.1-201ENST00000364671 133 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 SNORD93-201ENST00000408813 74 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 RNU6-602P-201ENST00000411155 105 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 MTATP6P17-201ENST00000431030 672 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 RNU7-4P-201ENST00000516961 62 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 AP000942.4-201ENST00000604811 241 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 AC022079.1-201ENST00000621546 602 ntBASIC-0.31□□□□□ -2.46
VAPAQ9P0L0 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.32□□□□□ -2.46
VAPAQ9P0L0 MIR563-201ENST00000385080 79 ntBASIC-0.32□□□□□ -2.46
VAPAQ9P0L0 MIR214-201ENST00000385214 110 ntBASIC-0.32□□□□□ -2.46
VAPAQ9P0L0 RNU4-83P-201ENST00000410863 133 ntBASIC-0.32□□□□□ -2.46
VAPAQ9P0L0 MIR4752-201ENST00000579672 72 ntBASIC-0.32□□□□□ -2.46
VAPAQ9P0L0 MIR8066-201ENST00000617280 78 ntBASIC-0.32□□□□□ -2.46
VAPAQ9P0L0 AL669831.3-213ENST00000636676 183 ntBASIC-0.32□□□□□ -2.46
VAPAQ9P0L0 TPTEP1-208ENST00000636884 213 ntBASIC-0.32□□□□□ -2.46
VAPAQ9P0L0 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 MIR628-201ENST00000385229 95 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 SNORD12C-201ENST00000386307 89 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 RNA5SP127-201ENST00000411051 133 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 MTND3P8-201ENST00000412909 339 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 RNU7-141P-201ENST00000459304 62 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 RNU7-53P-201ENST00000516705 60 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 MIR3145-201ENST00000580727 82 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 AC092447.9-201ENST00000603395 144 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 MIR6779-201ENST00000617283 64 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 uc_338.22-201ENST00000622722 187 ntBASIC-0.33□□□□□ -2.46
VAPAQ9P0L0 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.34□□□□□ -2.46
VAPAQ9P0L0 RNU6-740P-201ENST00000364734 105 ntBASIC-0.34□□□□□ -2.46
VAPAQ9P0L0 RNU6-708P-201ENST00000384217 107 ntBASIC-0.34□□□□□ -2.46
VAPAQ9P0L0 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.34□□□□□ -2.46
VAPAQ9P0L0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.34□□□□□ -2.46
VAPAQ9P0L0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.34□□□□□ -2.46
VAPAQ9P0L0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.34□□□□□ -2.46
VAPAQ9P0L0 U2.1-201ENST00000618978 145 ntBASIC-0.34□□□□□ -2.46
VAPAQ9P0L0 U6.92-201ENST00000636464 89 ntBASIC-0.34□□□□□ -2.46
VAPAQ9P0L0 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 SNORD81.1-201ENST00000363064 77 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 RNU4-75P-201ENST00000364621 146 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 SNORD114-12-201ENST00000365400 75 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 MIR106A-201ENST00000384870 81 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 SNORA40.5-201ENST00000391061 128 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 AC005357.1-201ENST00000588399 301 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 MIR6828-201ENST00000636181 60 ntBASIC-0.35□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 SNORD115-28-201ENST00000363931 81 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 RNU2-14P-201ENST00000411053 191 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 RPL39P25-201ENST00000449384 154 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 AC023449.1-201ENST00000454464 154 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 RNU6-848P-201ENST00000515948 107 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 RNU6-617P-201ENST00000516147 107 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 RNU6-473P-201ENST00000516164 107 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 AC091304.10-201ENST00000641554 121 ntBASIC-0.36□□□□□ -2.47
VAPAQ9P0L0 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 SNORA27-201ENST00000384323 126 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 MIR892B-201ENST00000401279 77 ntBASIC-0.37□□□□□ -2.47
VAPAQ9P0L0 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms