Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MTND1P11-201ENST00000456661 876 ntBASIC-1□□□□□ -2.57
LRTM1Q9HBL6 RNU7-116P-201ENST00000516940 62 ntBASIC-1□□□□□ -2.57
LRTM1Q9HBL6 RNU6-158P-201ENST00000517104 100 ntBASIC-1□□□□□ -2.57
LRTM1Q9HBL6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1□□□□□ -2.57
LRTM1Q9HBL6 AP003072.1-201ENST00000531740 145 ntBASIC-1□□□□□ -2.57
LRTM1Q9HBL6 MIR4273-201ENST00000582824 84 ntBASIC-1□□□□□ -2.57
LRTM1Q9HBL6 AL133255.1-201ENST00000606374 441 ntBASIC-1□□□□□ -2.57
LRTM1Q9HBL6 SNORD114-14-201ENST00000362723 75 ntBASIC-1.01□□□□□ -2.57
LRTM1Q9HBL6 RNY4P6-201ENST00000363667 96 ntBASIC-1.01□□□□□ -2.57
LRTM1Q9HBL6 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.01□□□□□ -2.57
LRTM1Q9HBL6 RNU4-20P-201ENST00000365601 151 ntBASIC-1.01□□□□□ -2.57
LRTM1Q9HBL6 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.01□□□□□ -2.57
LRTM1Q9HBL6 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.01□□□□□ -2.57
LRTM1Q9HBL6 MIR101-2-201ENST00000362195 79 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 RNY4P27-201ENST00000363341 96 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 RNU6-254P-201ENST00000363377 107 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 RNU4-75P-201ENST00000364621 146 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 RNU6-726P-201ENST00000364680 107 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 RNU6-24P-201ENST00000384440 107 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 SNORD12C-201ENST00000386307 89 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 AC131281.1-201ENST00000522984 164 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 MTND5P34-201ENST00000568888 325 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 AC245008.1-201ENST00000608123 476 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 AC084368.1-201ENST00000620935 65 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 AC073869.9-201ENST00000641610 120 ntBASIC-1.02□□□□□ -2.57
LRTM1Q9HBL6 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 SNORA72.3-201ENST00000365074 132 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 SNORA1-201ENST00000384107 130 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 RNU6-708P-201ENST00000384217 107 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 RPL7P42-201ENST00000481005 679 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 RNU6-1265P-201ENST00000516342 103 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 MTCO2P4-201ENST00000517968 247 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 AP000942.4-201ENST00000604811 241 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 AP001330.5-201ENST00000607176 411 ntBASIC-1.03□□□□□ -2.57
LRTM1Q9HBL6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 U8.6-201ENST00000364939 135 ntBASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 RNU6-596P-201ENST00000365395 98 ntBASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 SPINT5P-201ENST00000448174 155 ntBASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 RNU6-966P-201ENST00000516479 104 ntBASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 RNA5SP169-201ENST00000517268 117 ntBASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 MIR3165-201ENST00000579874 75 ntBASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 MIR5188-201ENST00000583467 113 ntBASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 AC004467.1-201ENST00000615678 330 ntBASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.04□□□□□ -2.58
LRTM1Q9HBL6 RNY3P10-201ENST00000384764 102 ntBASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 MIR190B-201ENST00000401119 79 ntBASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 MTND3P21-201ENST00000433774 331 ntBASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 RNU6-437P-201ENST00000459408 95 ntBASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 MIR2681-201ENST00000581814 105 ntBASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 AC245884.10-201ENST00000597355 337 ntBASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 AC105081.1-201ENST00000617727 106 ntBASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 AL596211.1-201ENST00000569873 2277 ntBASIC-1.05□□□□□ -2.58
LRTM1Q9HBL6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 SNORA72.6-201ENST00000384520 129 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 MIR514A2-201ENST00000385131 88 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 MIR514A3-201ENST00000385132 88 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 SNORD83B-201ENST00000386745 93 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 SNORD72-201ENST00000390994 80 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 AL603910.2-201ENST00000407268 136 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 AC083904.1-201ENST00000487828 231 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 AC107308.1-201ENST00000615897 301 ntBASIC-1.06□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 RNA5SP245-201ENST00000364239 121 ntBASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 MTCO2P19-201ENST00000427513 598 ntBASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 MTND1P27-201ENST00000451117 902 ntBASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 MTND3P16-201ENST00000452205 344 ntBASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 RNU7-87P-201ENST00000459343 62 ntBASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 RNU7-25P-201ENST00000516544 62 ntBASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.07□□□□□ -2.58
LRTM1Q9HBL6 RNU4-28P-201ENST00000364739 141 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 MIR620-201ENST00000385232 95 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 RNA5SP237-201ENST00000410414 113 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 MIR4491-201ENST00000581087 68 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 AC063944.3-201ENST00000609969 533 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 AF246928.1-201ENST00000623768 87 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 AC097520.1-201ENST00000624435 385 ntBASIC-1.08□□□□□ -2.58
LRTM1Q9HBL6 RNU6-522P-201ENST00000364497 107 ntBASIC-1.09□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.09□□□□□ -2.58
LRTM1Q9HBL6 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms