Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 Y_RNA.16-201ENST00000362421 102 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 Y_RNA.64-201ENST00000362845 102 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 RNU6-1205P-201ENST00000363625 106 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 RNU6-899P-201ENST00000363947 107 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 RNU6-290P-201ENST00000365212 101 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 Y_RNA.380-201ENST00000365663 111 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 AL035398.1-201ENST00000430869 322 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 AC113410.1-201ENST00000505029 247 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 RNU7-181P-201ENST00000517234 74 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 MIR2681-201ENST00000581814 105 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 AC087685.1-201ENST00000587507 141 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 Pinc.1-201ENST00000616452 154 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 AC007742.2-201ENST00000618226 398 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 AC008133.2-201ENST00000624540 351 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 AL442644.1-201ENST00000454390 3105 ntBASIC0.64□□□□□ -2.31
NPAS2Q99743 RNU6-1272P-201ENST00000362776 107 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 Y_RNA.153-201ENST00000363615 91 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 RNA5SP48-201ENST00000363969 126 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 BTF3P11-201ENST00000426582 477 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.63□□□□□ -2.31
NPAS2Q99743 U7.7-201ENST00000459276 60 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 AC091959.1-201ENST00000495857 238 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.63□□□□□ -2.31
NPAS2Q99743 RNU6-1153P-201ENST00000516760 105 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 RNU2-31P-201ENST00000516954 155 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.63□□□□□ -2.31
NPAS2Q99743 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.63□□□□□ -2.31
NPAS2Q99743 AC025627.3-201ENST00000582078 182 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.63□□□□□ -2.31
NPAS2Q99743 AL512605.2-201ENST00000592972 256 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 AL356055.1-201ENST00000602528 446 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 AL355297.3-201ENST00000604082 446 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.63□□□□□ -2.31
NPAS2Q99743 MIR4251-201ENST00000635819 61 ntBASIC0.63□□□□□ -2.31
NPAS2Q99743 SNORA25.1-201ENST00000362326 128 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 RNU6-654P-201ENST00000364373 107 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 U8.17-201ENST00000391292 132 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 MIR1302-7-201ENST00000408841 72 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 RNA5SP95-201ENST00000410319 137 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 Y_RNA.701-201ENST00000516812 110 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 AP003733.2-201ENST00000529409 171 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 AC131055.1-201ENST00000584626 316 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 AC012433.1-201ENST00000588916 398 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 AL049861.1-201ENST00000603130 150 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 AC013791.1-201ENST00000616619 62 ntBASIC0.62□□□□□ -2.31
NPAS2Q99743 RNU4-10P-201ENST00000364383 140 ntBASIC0.61□□□□□ -2.31
NPAS2Q99743 Y_RNA.293-201ENST00000364908 93 ntBASIC0.61□□□□□ -2.31
NPAS2Q99743 RNU6-1335P-201ENST00000365426 107 ntBASIC0.61□□□□□ -2.31
NPAS2Q99743 RNU6-514P-201ENST00000384208 107 ntBASIC0.61□□□□□ -2.31
NPAS2Q99743 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
NPAS2Q99743 AC109810.1-201ENST00000534066 224 ntBASIC0.61□□□□□ -2.31
NPAS2Q99743 MIR5692C2-201ENST00000577959 77 ntBASIC0.61□□□□□ -2.31
NPAS2Q99743 RNU6-94P-201ENST00000607728 107 ntBASIC0.61□□□□□ -2.31
NPAS2Q99743 AC022140.2-201ENST00000623500 188 ntBASIC0.61□□□□□ -2.31
NPAS2Q99743 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.6□□□□□ -2.31
NPAS2Q99743 MIR367-201ENST00000362299 68 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 Y_RNA.84-201ENST00000363011 104 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 Y_RNA.202-201ENST00000364083 110 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 Y_RNA.276-201ENST00000364732 109 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 RNU6-326P-201ENST00000365480 107 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 SNORA53-201ENST00000391141 249 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.6□□□□□ -2.31
NPAS2Q99743 AL392103.1-201ENST00000447000 198 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 RNU6-830P-201ENST00000516353 107 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 RNU7-25P-201ENST00000516544 62 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 RNU7-149P-201ENST00000516739 59 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 SCARNA24.2-201ENST00000516968 130 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 AC037487.3-201ENST00000606668 112 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 AL008718.3-201ENST00000610217 321 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 AC006441.5-201ENST00000612680 209 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 snoU18.1-201ENST00000629629 71 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 MIR6516-201ENST00000630554 81 ntBASIC0.6□□□□□ -2.31
NPAS2Q99743 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
NPAS2Q99743 AC023934.1-201ENST00000574529 2389 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 SNORA33.2-201ENST00000365413 134 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 RNU6-144P-201ENST00000383951 107 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 MTCYBP6-201ENST00000441810 138 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 RNU4-57P-201ENST00000515980 135 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 Y_RNA.666-201ENST00000516187 112 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 RNU6-1110P-201ENST00000516462 101 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 RNU11-2P-201ENST00000516898 142 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 RNU6-570P-201ENST00000517051 105 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 AC036111.3-201ENST00000526389 112 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 MIR548AO-201ENST00000579992 96 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 AL021707.8-201ENST00000609428 183 ntBASIC0.59□□□□□ -2.31
NPAS2Q99743 Y_RNA.14-201ENST00000362415 103 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 Y_RNA.217-201ENST00000364214 105 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 Y_RNA.370-201ENST00000365589 108 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 SNORA51.10-201ENST00000384418 136 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 Y_RNA.512-201ENST00000384518 102 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 Y_RNA.547-201ENST00000384654 119 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 Y_RNA.572-201ENST00000384757 98 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 330 ms