Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 SNRPGP14-201ENST00000435400 219 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 AC090255.1-201ENST00000495779 349 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 SNORD36C-201ENST00000516733 66 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 SCARNA15-202ENST00000516881 127 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 SNORA31.25-201ENST00000517242 134 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 IGKV1-22-201ENST00000524313 326 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.93□□□□□ -2.1
TIMP4Q99727 SNORA28-201ENST00000606769 126 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 AC025166.1-201ENST00000612411 163 ntBASIC1.93□□□□□ -2.1
TIMP4Q99727 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
TIMP4Q99727 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.92□□□□□ -2.1
TIMP4Q99727 Y_RNA.37-201ENST00000362606 108 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 Y_RNA.336-201ENST00000365307 109 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 SNORA22-201ENST00000383907 134 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 RNU6-1189P-201ENST00000383958 107 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 MIR548A1-201ENST00000385041 97 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 RNY4P18-201ENST00000391107 89 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 RN7SKP200-201ENST00000410564 320 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 CALM2P4-201ENST00000430810 426 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 AL445646.1-201ENST00000431784 216 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.92□□□□□ -2.1
TIMP4Q99727 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.92□□□□□ -2.1
TIMP4Q99727 MIR3124-201ENST00000582636 67 ntBASIC1.92□□□□□ -2.1
TIMP4Q99727 RNA5SP37-201ENST00000365420 130 ntBASIC1.91□□□□□ -2.1
TIMP4Q99727 Y_RNA.410-201ENST00000383992 113 ntBASIC1.91□□□□□ -2.1
TIMP4Q99727 U8.16-201ENST00000391279 133 ntBASIC1.91□□□□□ -2.1
TIMP4Q99727 AL356379.1-201ENST00000414105 126 ntBASIC1.91□□□□□ -2.1
TIMP4Q99727 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.91□□□□□ -2.1
TIMP4Q99727 UBL5P3-201ENST00000475112 231 ntBASIC1.91□□□□□ -2.1
TIMP4Q99727 PDCD5P2-201ENST00000507570 312 ntBASIC1.91□□□□□ -2.1
TIMP4Q99727 MIR5197-201ENST00000583721 112 ntBASIC1.91□□□□□ -2.1
TIMP4Q99727 AL670379.3-201ENST00000605040 251 ntBASIC1.91□□□□□ -2.1
TIMP4Q99727 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TIMP4Q99727 MTND5P18-201ENST00000445624 1801 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 RNA5SP138-201ENST00000365098 114 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 Y_RNA.366-201ENST00000365540 102 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 MIR504-201ENST00000385065 83 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 HMGN2P39-201ENST00000398005 273 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 AL034345.1-201ENST00000407768 123 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 RNA5SP270-201ENST00000411361 118 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TIMP4Q99727 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.9□□□□□ -2.11
TIMP4Q99727 AC069257.2-201ENST00000441819 155 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 HMGN2P32-201ENST00000444648 269 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 Y_RNA.649-201ENST00000459077 103 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 AC055731.1-201ENST00000474387 401 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 CYCTP-201ENST00000504253 315 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 RNU6-240P-201ENST00000516098 97 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 SNORA18.7-201ENST00000516910 131 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 RNU7-70P-201ENST00000516941 66 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 Y_RNA.709-201ENST00000516952 92 ntBASIC1.9□□□□□ -2.11
TIMP4Q99727 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.9□□□□□ -2.11
TIMP4Q99727 MIRLET7C-201ENST00000362160 84 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 MIR342-201ENST00000362212 99 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 RNU6-153P-201ENST00000364422 104 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 Y_RNA.346-201ENST00000365385 112 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 SNORD38C-201ENST00000384381 69 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 SNORD116-21-201ENST00000384507 92 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 Y_RNA.528-201ENST00000384575 108 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 RNA5SP501-201ENST00000410990 112 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 RNU7-12P-201ENST00000516030 62 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 RNA5SP168-201ENST00000516642 112 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 AP003484.1-201ENST00000530974 250 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
TIMP4Q99727 AL137067.1-201ENST00000615933 120 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 MIR7843-201ENST00000622274 79 ntBASIC1.89□□□□□ -2.11
TIMP4Q99727 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
TIMP4Q99727 AC092881.1-201ENST00000638218 2733 ntBASIC1.88□□□□□ -2.11
TIMP4Q99727 Y_RNA.351-201ENST00000365436 96 ntBASIC1.88□□□□□ -2.11
TIMP4Q99727 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
TIMP4Q99727 RNA5SP465-201ENST00000391195 109 ntBASIC1.88□□□□□ -2.11
TIMP4Q99727 MIR1289-2-201ENST00000408360 111 ntBASIC1.88□□□□□ -2.11
TIMP4Q99727 RNU6-938P-201ENST00000411285 103 ntBASIC1.88□□□□□ -2.11
TIMP4Q99727 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.88□□□□□ -2.11
TIMP4Q99727 RNU7-34P-201ENST00000459394 64 ntBASIC1.88□□□□□ -2.11
TIMP4Q99727 RNU2-19P-201ENST00000517288 84 ntBASIC1.88□□□□□ -2.11
TIMP4Q99727 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TIMP4Q99727 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TIMP4Q99727 Y_RNA.35-201ENST00000362601 101 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 SNORA63D-201ENST00000364359 132 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 RNU6-690P-201ENST00000365242 106 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 MIR520A-201ENST00000384862 85 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TIMP4Q99727 SNX2P2-201ENST00000424553 323 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 AC015922.2-201ENST00000435593 184 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 AC093850.1-201ENST00000454121 251 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 RPL23AP63-201ENST00000498752 471 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 RNU6-589P-201ENST00000516485 107 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 RNA5SP437-201ENST00000517249 129 ntBASIC1.87□□□□□ -2.11
TIMP4Q99727 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
TIMP4Q99727 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TIMP4Q99727 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TIMP4Q99727 AC131280.1-202ENST00000624067 4211 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
TIMP4Q99727 RNU1-133P-201ENST00000364867 167 ntBASIC1.86□□□□□ -2.11
TIMP4Q99727 Y_RNA.440-201ENST00000384120 114 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 202.6 ms