Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SNORD72-201ENST00000390994 80 ntBASIC1.61□□□□□ -2.15
PKP4Q99569 RNU1-78P-201ENST00000391248 165 ntBASIC1.61□□□□□ -2.15
PKP4Q99569 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.61□□□□□ -2.15
PKP4Q99569 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.61□□□□□ -2.15
PKP4Q99569 JTBP1-201ENST00000441314 247 ntBASIC1.61□□□□□ -2.15
PKP4Q99569 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.61□□□□□ -2.15
PKP4Q99569 SNORA25.12-201ENST00000516202 82 ntBASIC1.61□□□□□ -2.15
PKP4Q99569 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.61□□□□□ -2.15
PKP4Q99569 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
PKP4Q99569 SNORD113-1-201ENST00000365321 69 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 RNU6-81P-201ENST00000365608 104 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 MIR802-201ENST00000390235 94 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PKP4Q99569 RNU6-588P-201ENST00000410281 105 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 RN7SKP200-201ENST00000410564 320 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 HSPE1P9-201ENST00000440046 311 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 STAG3L5P-204ENST00000443759 179 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 AC245517.4-201ENST00000448601 281 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.6□□□□□ -2.15
PKP4Q99569 RNA5SP458-201ENST00000516188 119 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 RNU6-504P-201ENST00000516568 104 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 SNORA77B-201ENST00000578179 125 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 AC091895.1-201ENST00000624494 256 ntBASIC1.6□□□□□ -2.15
PKP4Q99569 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
PKP4Q99569 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PKP4Q99569 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.6□□□□□ -2.15
PKP4Q99569 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
PKP4Q99569 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
PKP4Q99569 RNU6-1084P-201ENST00000362498 107 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 Y_RNA.66-201ENST00000362862 102 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 RNU6-1082P-201ENST00000364574 107 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 snoU2-30.1-201ENST00000365012 70 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 RNU7-197P-201ENST00000458836 62 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 AC005908.1-201ENST00000468701 347 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 SNORA31.10-201ENST00000516482 106 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 AC090142.3-201ENST00000519012 385 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 AC010332.2-201ENST00000613083 1904 ntBASIC1.59□□□□□ -2.15
PKP4Q99569 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
PKP4Q99569 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PKP4Q99569 SNORD14E-201ENST00000364009 85 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 SNORD50B-201ENST00000364995 70 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 SNORD24-201ENST00000383884 75 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 RNU6-442P-201ENST00000383968 104 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 SNORA40-201ENST00000388090 126 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 Y_RNA.586-201ENST00000391146 98 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 AL034345.1-201ENST00000407768 123 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 RNU6-257P-201ENST00000410238 98 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 RNU2-7P-201ENST00000410794 178 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.58□□□□□ -2.16
PKP4Q99569 AL606753.1-201ENST00000427435 87 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 AC092991.1-201ENST00000477176 376 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 RNA5SP272-201ENST00000516095 111 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 SNORD45.4-201ENST00000516629 73 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 RNA5SP437-201ENST00000517249 129 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 MIR3683-201ENST00000580847 82 ntBASIC1.58□□□□□ -2.16
PKP4Q99569 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.57□□□□□ -2.16
PKP4Q99569 RNA5SP99-201ENST00000364020 114 ntBASIC1.57□□□□□ -2.16
PKP4Q99569 Y_RNA.251-201ENST00000364551 99 ntBASIC1.57□□□□□ -2.16
PKP4Q99569 Y_RNA.420-201ENST00000384043 110 ntBASIC1.57□□□□□ -2.16
PKP4Q99569 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
PKP4Q99569 Y_RNA.666-201ENST00000516187 112 ntBASIC1.57□□□□□ -2.16
PKP4Q99569 AC007751.1-201ENST00000529260 376 ntBASIC1.57□□□□□ -2.16
PKP4Q99569 AL365205.2-201ENST00000594586 68 ntBASIC1.57□□□□□ -2.16
PKP4Q99569 SNORD33-201ENST00000362761 85 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 RNU6-888P-201ENST00000363010 101 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 RNA5SP190-201ENST00000365222 118 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 Y_RNA.336-201ENST00000365307 109 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 SNORA4.2-201ENST00000365313 147 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 RNU6-1336P-201ENST00000383886 109 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 SNORD61-201ENST00000384252 73 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 Y_RNA.584-201ENST00000391090 114 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 SNRPGP13-201ENST00000442212 177 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 HMGN2P32-201ENST00000444648 269 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 RNA5SP445-201ENST00000515889 115 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.56□□□□□ -2.16
PKP4Q99569 AC006441.5-201ENST00000612680 209 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 AP001340.1-201ENST00000624405 217 ntBASIC1.56□□□□□ -2.16
PKP4Q99569 MIRLET7C-201ENST00000362160 84 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 MIR302D-201ENST00000362275 68 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 RNU6-163P-201ENST00000384396 106 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 Y_RNA.542-201ENST00000384641 111 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 SNORA20-201ENST00000384662 132 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 RNU6-959P-201ENST00000384671 107 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 RNU6-1031P-201ENST00000384773 107 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 RNU6-460P-201ENST00000391158 108 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.55□□□□□ -2.16
PKP4Q99569 MTND4LP9-201ENST00000427694 174 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 CYCTP-201ENST00000504253 315 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 RNU6-693P-201ENST00000516134 107 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 SNORA18.4-201ENST00000516440 124 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 AC027279.3-201ENST00000625055 122 ntBASIC1.55□□□□□ -2.16
PKP4Q99569 RNY1P11-201ENST00000363759 113 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 RNU6-268P-201ENST00000364174 107 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 RNU6-1292P-201ENST00000383856 107 ntBASIC1.54□□□□□ -2.16
PKP4Q99569 SNORA1-201ENST00000384107 130 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms