Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AL163195.1-201ENST00000496941 348 ntBASIC1.88□□□□□ -2.11
ZNF48Q96MX3 RNU7-25P-201ENST00000516544 62 ntBASIC1.88□□□□□ -2.11
ZNF48Q96MX3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ZNF48Q96MX3 AC006254.2-201ENST00000603259 279 ntBASIC1.88□□□□□ -2.11
ZNF48Q96MX3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.88□□□□□ -2.11
ZNF48Q96MX3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.88□□□□□ -2.11
ZNF48Q96MX3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
ZNF48Q96MX3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
ZNF48Q96MX3 SNORD68-201ENST00000363214 84 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 RNU6-442P-201ENST00000383968 104 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 Y_RNA.410-201ENST00000383992 113 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 MIR29C-201ENST00000385231 88 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 SNORD12C-201ENST00000386307 89 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 MIR802-201ENST00000390235 94 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 RPS26P48-201ENST00000491713 339 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 RNU6-240P-201ENST00000516098 97 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 MIR4524B-201ENST00000581569 115 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
ZNF48Q96MX3 AC134878.1-201ENST00000619901 243 ntBASIC1.87□□□□□ -2.11
ZNF48Q96MX3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ZNF48Q96MX3 RNU6-862P-201ENST00000362804 105 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 SNORD14E-201ENST00000364009 85 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 RNU6-268P-201ENST00000364174 107 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 RNU11-3P-201ENST00000391111 133 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 HMGN2P3-201ENST00000433603 273 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 AC099677.2-201ENST00000436385 175 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 HMGN2P5-201ENST00000436882 273 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.86□□□□□ -2.11
ZNF48Q96MX3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.86□□□□□ -2.11
ZNF48Q96MX3 RNU6-237P-201ENST00000515985 71 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 SNORA72.7-201ENST00000516349 94 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 Y_RNA.677-201ENST00000516401 85 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 MIR5582-201ENST00000579697 68 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 MIR4769-201ENST00000584126 77 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.86□□□□□ -2.11
ZNF48Q96MX3 AC009831.4-201ENST00000620744 325 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 MIR6873-201ENST00000622788 63 ntBASIC1.86□□□□□ -2.11
ZNF48Q96MX3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
ZNF48Q96MX3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZNF48Q96MX3 MIR21-201ENST00000362134 72 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 SNORD115-28-201ENST00000363931 81 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 RNA5SP493-201ENST00000364115 91 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 snoU2-30.1-201ENST00000365012 70 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 RNU6-1189P-201ENST00000383958 107 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 Y_RNA.547-201ENST00000384654 119 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 AL606517.2-201ENST00000442855 241 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 RPL23AP6-201ENST00000446637 472 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 RPL23AP42-201ENST00000471152 471 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 RNU6-537P-201ENST00000517277 103 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 MIR3169-201ENST00000578032 83 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 MIR5007-201ENST00000583098 95 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 AL035470.1-201ENST00000622571 220 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 AC106754.2-201ENST00000623006 233 ntBASIC1.85□□□□□ -2.11
ZNF48Q96MX3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
ZNF48Q96MX3 ZNF720P1-201ENST00000562403 1939 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 RNU6-349P-201ENST00000362402 107 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 RNU6-766P-201ENST00000362478 107 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 Y_RNA.198-201ENST00000364013 98 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 SNORA2.2-201ENST00000365473 135 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 MIR597-201ENST00000384968 97 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 MIR764-201ENST00000390811 85 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 MIR1283-2-201ENST00000408621 87 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 AC245047.3-201ENST00000429428 127 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 SNORD45.4-201ENST00000516629 73 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 RNY4P20-201ENST00000516678 93 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 SNORD36C-201ENST00000516733 66 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 AC022513.1-201ENST00000624512 117 ntBASIC1.84□□□□□ -2.11
ZNF48Q96MX3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
ZNF48Q96MX3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
ZNF48Q96MX3 RNU6-1084P-201ENST00000362498 107 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 SNORD114-1-201ENST00000362705 72 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 RNU6-690P-201ENST00000365242 106 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 Y_RNA.369-201ENST00000365568 117 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 Y_RNA.440-201ENST00000384120 114 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 MIR221-201ENST00000385135 110 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.83□□□□□ -2.12
ZNF48Q96MX3 AL773524.1-201ENST00000614065 229 ntBASIC1.83□□□□□ -2.12
ZNF48Q96MX3 RNU6-23P-201ENST00000363283 107 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 Y_RNA.348-201ENST00000365403 103 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 RNU6-756P-201ENST00000383997 107 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 RNU6-905P-201ENST00000384434 107 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 SNORA64-201ENST00000384674 134 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ZNF48Q96MX3 RNA5SP465-201ENST00000391195 109 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 RNA5SP482-201ENST00000391269 118 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 RNU6-938P-201ENST00000411285 103 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 RNA5SP57-201ENST00000459463 123 ntBASIC1.82□□□□□ -2.12
ZNF48Q96MX3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 339.1 ms