Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 Y_RNA.85-201ENST00000363014 111 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 RNU4-73P-201ENST00000363164 141 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 SNORD113-8-201ENST00000363497 74 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 RNU6-899P-201ENST00000363947 107 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 Y_RNA.418-201ENST00000384029 102 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 Y_RNA.424-201ENST00000384063 103 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 RNU6-847P-201ENST00000411115 108 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 RNU2-13P-201ENST00000515909 113 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 MIR4801-201ENST00000582704 82 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 MIR376A1-201ENST00000616574 68 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 uc_338.22-201ENST00000622722 187 ntBASIC0.48□□□□□ -2.33
ITCHQ96J02 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
ITCHQ96J02 MIR377-201ENST00000362145 69 ntBASIC0.47□□□□□ -2.33
ITCHQ96J02 MIR330-201ENST00000362196 94 ntBASIC0.47□□□□□ -2.33
ITCHQ96J02 Y_RNA.136-201ENST00000363444 102 ntBASIC0.47□□□□□ -2.33
ITCHQ96J02 MT-TN-201ENST00000387400 73 ntBASIC0.47□□□□□ -2.33
ITCHQ96J02 RNU6-308P-201ENST00000390957 107 ntBASIC0.47□□□□□ -2.33
ITCHQ96J02 AC023449.1-201ENST00000454464 154 ntBASIC0.47□□□□□ -2.33
ITCHQ96J02 RNU6-764P-201ENST00000516396 105 ntBASIC0.47□□□□□ -2.33
ITCHQ96J02 AL133255.1-201ENST00000606374 441 ntBASIC0.47□□□□□ -2.33
ITCHQ96J02 RNU6-1205P-201ENST00000363625 106 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 SNORA63.7-201ENST00000365579 123 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 Y_RNA.376-201ENST00000365638 108 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 RNU6-144P-201ENST00000383951 107 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 Y_RNA.445-201ENST00000384168 102 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 RNU6-102P-201ENST00000384485 104 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 MT-TD-201ENST00000387419 68 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 RNU6-763P-201ENST00000390865 106 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 Y_RNA.602-201ENST00000410535 92 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 HSPE1P25-201ENST00000455484 251 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 RNU6-1170P-201ENST00000515974 106 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 RNU6-496P-201ENST00000516145 99 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 RNU7-25P-201ENST00000516544 62 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 AP000753.3-201ENST00000604083 169 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 Y_RNA.804-201ENST00000615262 101 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 AC243994.1-201ENST00000618627 109 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 AC022140.2-201ENST00000623500 188 ntBASIC0.46□□□□□ -2.34
ITCHQ96J02 RNU4-90P-201ENST00000362773 141 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 Y_RNA.183-201ENST00000363882 113 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 RNU6-580P-201ENST00000365159 107 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 Y_RNA.395-201ENST00000383945 109 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 Y_RNA.433-201ENST00000384089 102 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 MIR1197-201ENST00000408818 88 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 RNA5SP222-201ENST00000411039 105 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 MTND4P19-201ENST00000446659 478 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 RNU6-397P-201ENST00000516226 104 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 C8orf59P2-201ENST00000603441 271 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 AC124312.5-201ENST00000604451 268 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 AC090574.1-201ENST00000623186 233 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
ITCHQ96J02 RNA5SP62-201ENST00000363457 110 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 RNU6-945P-201ENST00000383947 107 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 RNY3P14-201ENST00000384309 102 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 Y_RNA.547-201ENST00000384654 119 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 Y_RNA.569-201ENST00000384749 103 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
ITCHQ96J02 RNU6-205P-201ENST00000390858 107 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 SNORD115-46-201ENST00000390982 71 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 MIR548O-201ENST00000408583 114 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 RNA5SP127-201ENST00000411051 133 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.44□□□□□ -2.34
ITCHQ96J02 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.44□□□□□ -2.34
ITCHQ96J02 AC107297.1-201ENST00000459991 176 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.44□□□□□ -2.34
ITCHQ96J02 MRPS35P2-201ENST00000508242 191 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 uc_338.4-201ENST00000616635 176 ntBASIC0.44□□□□□ -2.34
ITCHQ96J02 RNU6-369P-201ENST00000362515 102 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 SNORD45.3-201ENST00000363836 72 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 RNU6-125P-201ENST00000384505 107 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 MTCO1P5-201ENST00000433573 344 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.43□□□□□ -2.34
ITCHQ96J02 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 RNU7-149P-201ENST00000516739 59 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 Y_RNA.715-201ENST00000517082 110 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 MIR4264-201ENST00000583520 66 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 AL021707.8-201ENST00000609428 183 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 AC013791.1-201ENST00000616619 62 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 AC090971.5-201ENST00000621102 293 ntBASIC0.43□□□□□ -2.34
ITCHQ96J02 MIR369-201ENST00000362155 70 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 Y_RNA.14-201ENST00000362415 103 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 SNORA24-201ENST00000384096 131 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 Y_RNA.645-201ENST00000391229 102 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 RNA5SP496-201ENST00000391240 109 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 RNU6-383P-201ENST00000410864 94 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 snoU13.16-201ENST00000459350 104 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 snoU13.21-201ENST00000459368 105 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 RNU6-897P-201ENST00000517135 105 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 Z83818.1-201ENST00000603584 150 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 RAC1P9-201ENST00000604990 392 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 MIR2909-201ENST00000617113 69 ntBASIC0.42□□□□□ -2.34
ITCHQ96J02 RNU6-934P-201ENST00000365154 107 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms