Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AC005786.1-201ENST00000588553 154 ntBASIC2.79□□□□□ -1.96
TMEM40Q8WWA1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.79□□□□□ -1.96
TMEM40Q8WWA1 CTSLP2-204ENST00000629029 392 ntBASIC2.79□□□□□ -1.96
TMEM40Q8WWA1 AC091304.10-201ENST00000641554 121 ntBASIC2.79□□□□□ -1.96
TMEM40Q8WWA1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TMEM40Q8WWA1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 MAPK10-266ENST00000641066 6555 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 RNU6-832P-201ENST00000363319 107 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 Y_RNA.155-201ENST00000363632 101 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 Y_RNA.351-201ENST00000365436 96 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 MIR605-201ENST00000385078 83 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 RNU6-938P-201ENST00000411285 103 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 AC139453.2-201ENST00000487255 133 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 SNORD53-201ENST00000579969 78 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 MIR3618-201ENST00000580330 88 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 MIR4777-201ENST00000583710 86 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 U4.3-201ENST00000621047 82 ntBASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
TMEM40Q8WWA1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 AC008264.2-201ENST00000610193 3731 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 AL161431.1-201ENST00000618966 4205 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 Y_RNA.10-201ENST00000362371 110 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 SNORD115-28-201ENST00000363931 81 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 Y_RNA.440-201ENST00000384120 114 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 Y_RNA.547-201ENST00000384654 119 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 MIR522-201ENST00000385071 87 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 SNORA3.2-201ENST00000408221 125 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 BX510359.4-201ENST00000423750 193 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 RNA5SP137-201ENST00000516833 135 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 AC087685.1-201ENST00000587507 141 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 AC064859.1-201ENST00000624741 174 ntBASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TMEM40Q8WWA1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 MIR342-201ENST00000362212 99 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 Y_RNA.242-201ENST00000364473 110 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 RNU6-219P-201ENST00000364728 107 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 SNORD115-35-201ENST00000365122 82 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 Y_RNA.360-201ENST00000365512 102 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 SNORD116-22-201ENST00000384430 92 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 Y_RNA.507-201ENST00000384500 99 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 MIR802-201ENST00000390235 94 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 MIR1261-201ENST00000408659 82 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 AC245047.3-201ENST00000429428 127 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 FTH1P12-201ENST00000432137 551 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 RN7SL297P-201ENST00000483161 293 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 RNA5SP24-201ENST00000516478 95 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 MIR4694-201ENST00000578534 80 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 MIR4658-201ENST00000584344 65 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 AC069114.2-201ENST00000604699 304 ntBASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.76□□□□□ -1.97
TMEM40Q8WWA1 RNU6-363P-201ENST00000362895 105 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 SNORD115-13-201ENST00000363358 82 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 SNORD115-16-201ENST00000363887 82 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 RNU6-60P-201ENST00000364792 103 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 SNORD115-1-201ENST00000364961 82 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 RNU6-24P-201ENST00000384440 107 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 RN7SKP123-201ENST00000410732 291 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 RNU6-733P-201ENST00000410759 104 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 AC096949.1-201ENST00000412047 152 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 AL512326.2-201ENST00000426359 151 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 RNU7-171P-201ENST00000459581 62 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 SNORA18.7-201ENST00000516910 131 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 AC006441.5-201ENST00000612680 209 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 AC022513.1-201ENST00000624512 117 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 AC095038.3-201ENST00000634439 195 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 MIR203B-201ENST00000636080 86 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
TMEM40Q8WWA1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 SNORD68-201ENST00000363214 84 ntBASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 RNU6-268P-201ENST00000364174 107 ntBASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 RNU6-409P-201ENST00000384114 104 ntBASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 Y_RNA.454-201ENST00000384224 113 ntBASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 RNA5SP210-201ENST00000391034 120 ntBASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 AL445646.1-201ENST00000431784 216 ntBASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 AL353813.1-201ENST00000440700 253 ntBASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 AC091932.4-201ENST00000623386 200 ntBASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
TMEM40Q8WWA1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.73□□□□□ -1.97
TMEM40Q8WWA1 RNU6-776P-201ENST00000364403 104 ntBASIC2.73□□□□□ -1.97
TMEM40Q8WWA1 RNU4-67P-201ENST00000364569 141 ntBASIC2.73□□□□□ -1.97
TMEM40Q8WWA1 RNU6-1022P-201ENST00000365049 104 ntBASIC2.73□□□□□ -1.97
TMEM40Q8WWA1 Y_RNA.467-201ENST00000384297 102 ntBASIC2.73□□□□□ -1.97
TMEM40Q8WWA1 RNU11-3P-201ENST00000391111 133 ntBASIC2.73□□□□□ -1.97
TMEM40Q8WWA1 MRPL35P3-201ENST00000421557 364 ntBASIC2.73□□□□□ -1.97
TMEM40Q8WWA1 SNX2P2-201ENST00000424553 323 ntBASIC2.73□□□□□ -1.97
TMEM40Q8WWA1 AC073261.1-201ENST00000429409 121 ntBASIC2.73□□□□□ -1.97
TMEM40Q8WWA1 MIR3683-201ENST00000580847 82 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms