Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCD2Q8WV60 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCD2Q8WV60 RNA5SP119-201ENST00000362715 117 ntBASIC3.6□□□□□ -1.83
PTCD2Q8WV60 RN7SKP132-201ENST00000516001 208 ntBASIC3.6□□□□□ -1.83
PTCD2Q8WV60 RPL12P50-201ENST00000603116 116 ntBASIC3.6□□□□□ -1.83
PTCD2Q8WV60 AP000753.3-201ENST00000604083 169 ntBASIC3.6□□□□□ -1.83
PTCD2Q8WV60 SNORD14A-201ENST00000606526 91 ntBASIC3.6□□□□□ -1.83
PTCD2Q8WV60 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.6□□□□□ -1.83
PTCD2Q8WV60 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.6□□□□□ -1.83
PTCD2Q8WV60 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.6□□□□□ -1.83
PTCD2Q8WV60 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PTCD2Q8WV60 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PTCD2Q8WV60 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PTCD2Q8WV60 RNU1-58P-201ENST00000362413 163 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 RNU6-161P-201ENST00000363051 106 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 MIR483-201ENST00000385070 76 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 RPS29P4-201ENST00000414733 161 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 SNORD105B-201ENST00000458770 79 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 RNU6-1015P-201ENST00000517121 99 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.59□□□□□ -1.83
PTCD2Q8WV60 MIR4425-201ENST00000580572 84 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 MIR4796-201ENST00000580742 81 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 MIR8058-201ENST00000615737 89 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 AC022149.2-201ENST00000621061 203 ntBASIC3.59□□□□□ -1.83
PTCD2Q8WV60 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PTCD2Q8WV60 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTCD2Q8WV60 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
PTCD2Q8WV60 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
PTCD2Q8WV60 HSBP1P2-201ENST00000299671 229 ntBASIC3.58□□□□□ -1.84
PTCD2Q8WV60 SNORD21-201ENST00000383953 95 ntBASIC3.58□□□□□ -1.84
PTCD2Q8WV60 MIR490-201ENST00000384865 128 ntBASIC3.58□□□□□ -1.84
PTCD2Q8WV60 PRSS3P4-201ENST00000453323 162 ntBASIC3.58□□□□□ -1.84
PTCD2Q8WV60 Y_RNA.660-201ENST00000516002 120 ntBASIC3.58□□□□□ -1.84
PTCD2Q8WV60 RNU6-448P-201ENST00000517052 107 ntBASIC3.58□□□□□ -1.84
PTCD2Q8WV60 AC026333.2-201ENST00000542164 106 ntBASIC3.58□□□□□ -1.84
PTCD2Q8WV60 MIR3616-201ENST00000584070 92 ntBASIC3.58□□□□□ -1.84
PTCD2Q8WV60 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.58□□□□□ -1.84
PTCD2Q8WV60 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.58□□□□□ -1.84
PTCD2Q8WV60 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTCD2Q8WV60 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.58□□□□□ -1.84
PTCD2Q8WV60 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PTCD2Q8WV60 Y_RNA.333-201ENST00000365274 102 ntBASIC3.57□□□□□ -1.84
PTCD2Q8WV60 MIR526A1-201ENST00000384897 85 ntBASIC3.57□□□□□ -1.84
PTCD2Q8WV60 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PTCD2Q8WV60 BX510359.1-201ENST00000456973 237 ntBASIC3.57□□□□□ -1.84
PTCD2Q8WV60 RNU6-1108P-201ENST00000516308 104 ntBASIC3.57□□□□□ -1.84
PTCD2Q8WV60 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.57□□□□□ -1.84
PTCD2Q8WV60 XIST_intron.1-201ENST00000619444 68 ntBASIC3.57□□□□□ -1.84
PTCD2Q8WV60 AL353746.1-201ENST00000566293 6881 ntBASIC3.57□□□□□ -1.84
PTCD2Q8WV60 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCD2Q8WV60 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PTCD2Q8WV60 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PTCD2Q8WV60 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.56□□□□□ -1.84
PTCD2Q8WV60 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
PTCD2Q8WV60 SNORA63.1-201ENST00000362493 131 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 RNU1-70P-201ENST00000362618 164 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 MIR183-201ENST00000384958 110 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 RNA5SP237-201ENST00000410414 113 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 RN7SL293P-201ENST00000481765 281 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 RNU6-70P-201ENST00000516438 60 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 Y_RNA.681-201ENST00000516445 113 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 RNU6-807P-201ENST00000516805 107 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.56□□□□□ -1.84
PTCD2Q8WV60 AC012314.7-201ENST00000619693 93 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 U4.6-201ENST00000621618 127 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 U6.105-201ENST00000637379 88 ntBASIC3.56□□□□□ -1.84
PTCD2Q8WV60 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PTCD2Q8WV60 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCD2Q8WV60 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTCD2Q8WV60 RNY1P13-201ENST00000365030 105 ntBASIC3.55□□□□□ -1.84
PTCD2Q8WV60 MIR29C-201ENST00000385231 88 ntBASIC3.55□□□□□ -1.84
PTCD2Q8WV60 FGF7P7-201ENST00000514120 227 ntBASIC3.55□□□□□ -1.84
PTCD2Q8WV60 AC019176.2-201ENST00000611579 315 ntBASIC3.55□□□□□ -1.84
PTCD2Q8WV60 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
PTCD2Q8WV60 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PTCD2Q8WV60 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PTCD2Q8WV60 AC131280.1-202ENST00000624067 4211 ntBASIC3.54□□□□□ -1.84
PTCD2Q8WV60 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCD2Q8WV60 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCD2Q8WV60 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PTCD2Q8WV60 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PTCD2Q8WV60 RNU2-7P-201ENST00000410794 178 ntBASIC3.54□□□□□ -1.84
PTCD2Q8WV60 CYCSP4-201ENST00000429682 331 ntBASIC3.54□□□□□ -1.84
PTCD2Q8WV60 AC027119.1-201ENST00000440877 241 ntBASIC3.54□□□□□ -1.84
PTCD2Q8WV60 U3.45-201ENST00000607547 219 ntBASIC3.54□□□□□ -1.84
PTCD2Q8WV60 MIR7851-201ENST00000610611 160 ntBASIC3.54□□□□□ -1.84
PTCD2Q8WV60 MIR7153-201ENST00000637758 57 ntBASIC3.54□□□□□ -1.84
PTCD2Q8WV60 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCD2Q8WV60 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
PTCD2Q8WV60 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCD2Q8WV60 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
PTCD2Q8WV60 RNU7-85P-201ENST00000458851 63 ntBASIC3.53□□□□□ -1.84
PTCD2Q8WV60 AC025518.1-201ENST00000479856 347 ntBASIC3.53□□□□□ -1.84
PTCD2Q8WV60 MIR4484-201ENST00000582855 83 ntBASIC3.53□□□□□ -1.84
PTCD2Q8WV60 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.53□□□□□ -1.84
PTCD2Q8WV60 AL513423.1-201ENST00000621695 132 ntBASIC3.53□□□□□ -1.84
PTCD2Q8WV60 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PTCD2Q8WV60 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms