Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC091895.1-201ENST00000624494 256 ntBASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SYNPOQ8N3V7 RNU6-768P-201ENST00000384683 107 ntBASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 MIR583-201ENST00000384846 75 ntBASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 MIR136-201ENST00000385207 82 ntBASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 AL161935.2-201ENST00000414627 60 ntBASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 RNU7-25P-201ENST00000516544 62 ntBASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 AC090142.3-201ENST00000519012 385 ntBASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 AC010332.2-201ENST00000613083 1904 ntBASIC2.12□□□□□ -2.07
SYNPOQ8N3V7 RNY1P11-201ENST00000363759 113 ntBASIC2.11□□□□□ -2.07
SYNPOQ8N3V7 SNORD61-201ENST00000384252 73 ntBASIC2.11□□□□□ -2.07
SYNPOQ8N3V7 RNU6-1117P-201ENST00000384525 104 ntBASIC2.11□□□□□ -2.07
SYNPOQ8N3V7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.11□□□□□ -2.07
SYNPOQ8N3V7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.11□□□□□ -2.07
SYNPOQ8N3V7 MIR378D2-201ENST00000580636 98 ntBASIC2.11□□□□□ -2.07
SYNPOQ8N3V7 MIR6845-201ENST00000613182 61 ntBASIC2.11□□□□□ -2.07
SYNPOQ8N3V7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SYNPOQ8N3V7 WWP1P1-201ENST00000466609 2769 ntBASIC2.11□□□□□ -2.07
SYNPOQ8N3V7 Y_RNA.393-201ENST00000383936 102 ntBASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 RNU6-22P-201ENST00000384355 107 ntBASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 MIR526A1-201ENST00000384897 85 ntBASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 MTND4LP9-201ENST00000427694 174 ntBASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 AC092991.1-201ENST00000477176 376 ntBASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 AC112693.2-201ENST00000556538 232 ntBASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 MIR3646-201ENST00000578301 84 ntBASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 AC006441.5-201ENST00000612680 209 ntBASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SYNPOQ8N3V7 RNU6-1081P-201ENST00000384537 107 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 SNORA20-201ENST00000384662 132 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 SNORA40-201ENST00000388090 126 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 MIR513C-201ENST00000401352 84 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 RNU2-51P-201ENST00000410708 197 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 RNU6-322P-201ENST00000516010 103 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 RNU6-922P-201ENST00000516753 99 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 SNORA18.7-201ENST00000516910 131 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 MIR548AI-201ENST00000579940 88 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 MIR3937-201ENST00000580135 106 ntBASIC2.09□□□□□ -2.07
SYNPOQ8N3V7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 Y_RNA.420-201ENST00000384043 110 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 SNORD37.2-201ENST00000391075 66 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 CYCSP49-201ENST00000420810 319 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 SNRPGP14-201ENST00000435400 219 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 AC079140.2-201ENST00000506193 142 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 RNU6-479P-201ENST00000516348 105 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 AL160236.1-201ENST00000556317 195 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
SYNPOQ8N3V7 RNU1-17P-201ENST00000363022 152 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 RNU6-978P-201ENST00000364371 103 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 RNU6-597P-201ENST00000365620 102 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 AL451046.2-201ENST00000403074 277 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 RNU6-917P-201ENST00000516294 104 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 AC015688.6-201ENST00000577737 104 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 MIR3129-201ENST00000581095 76 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 AL365222.1-201ENST00000614661 98 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 MIR6844-201ENST00000637122 62 ntBASIC2.07□□□□□ -2.08
SYNPOQ8N3V7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 Y_RNA.251-201ENST00000364551 99 ntBASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 RNU6-1082P-201ENST00000364574 107 ntBASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 SNORA2.2-201ENST00000365473 135 ntBASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 Y_RNA.542-201ENST00000384641 111 ntBASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 RNU6-460P-201ENST00000391158 108 ntBASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 SNORA75.5-201ENST00000391291 81 ntBASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 RNU6-588P-201ENST00000410281 105 ntBASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 RNU6-971P-201ENST00000516920 106 ntBASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 AC097639.2-201ENST00000603159 172 ntBASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SYNPOQ8N3V7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 Y_RNA.66-201ENST00000362862 102 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 Y_RNA.140-201ENST00000363474 103 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 SNORD115-28-201ENST00000363931 81 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 Y_RNA.218-201ENST00000364218 104 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 SNORD24-201ENST00000383884 75 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 RNU6-1336P-201ENST00000383886 109 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 SNORA22C-201ENST00000384614 134 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 RNU6-1168P-201ENST00000390831 104 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 RNU6-62P-201ENST00000516526 102 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 RNU7-181P-201ENST00000517234 74 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 MIR4498-201ENST00000577599 66 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.05□□□□□ -2.08
SYNPOQ8N3V7 RNU6-888P-201ENST00000363010 101 ntBASIC2.04□□□□□ -2.08
SYNPOQ8N3V7 SNORA25.7-201ENST00000364375 127 ntBASIC2.04□□□□□ -2.08
SYNPOQ8N3V7 SNORD1A-201ENST00000364968 72 ntBASIC2.04□□□□□ -2.08
SYNPOQ8N3V7 RNA5SP37-201ENST00000365420 130 ntBASIC2.04□□□□□ -2.08
SYNPOQ8N3V7 RNU6-1154P-201ENST00000391001 104 ntBASIC2.04□□□□□ -2.08
SYNPOQ8N3V7 RNU2-40P-201ENST00000410833 196 ntBASIC2.04□□□□□ -2.08
SYNPOQ8N3V7 RNA5SP247-201ENST00000411181 105 ntBASIC2.04□□□□□ -2.08
SYNPOQ8N3V7 SNX2P2-201ENST00000424553 323 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms