Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 Y_RNA.82-201ENST00000363000 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.92-201ENST00000363043 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.235-201ENST00000364412 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.306-201ENST00000365015 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.312-201ENST00000365089 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.322-201ENST00000365151 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 RNU6-1138P-201ENST00000365359 106 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 MIR19B1-201ENST00000384829 87 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.650-201ENST00000459002 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 MTCO2P24-201ENST00000515611 426 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.777-201ENST00000516982 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 AP003716.2-201ENST00000528260 108 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 MIR4719-201ENST00000585233 84 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.771-201ENST00000598668 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 U2.14-201ENST00000615943 113 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.789-201ENST00000622480 102 ntBASIC0.93□□□□□ -2.26
CCDC71Q8IV32 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CCDC71Q8IV32 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.92□□□□□ -2.26
CCDC71Q8IV32 RNU6-740P-201ENST00000364734 105 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.354-201ENST00000365448 111 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.459-201ENST00000384251 102 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.461-201ENST00000384263 103 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.483-201ENST00000384380 101 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 MIR626-201ENST00000385032 94 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 AL358176.2-201ENST00000425769 204 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 SNORD2.1-201ENST00000458762 69 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 RPS26P48-201ENST00000491713 339 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 RNU7-41P-201ENST00000515917 61 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 RN7SKP164-201ENST00000516138 266 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 RNU7-149P-201ENST00000516739 59 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.92□□□□□ -2.26
CCDC71Q8IV32 MIR548AR-201ENST00000582191 57 ntBASIC0.92□□□□□ -2.26
CCDC71Q8IV32 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.47-201ENST00000362697 108 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 RNA5SP264-201ENST00000363115 107 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.117-201ENST00000363294 101 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 RNU6-472P-201ENST00000384299 107 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 SNORA8.3-201ENST00000384679 139 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 U8.17-201ENST00000391292 132 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC71Q8IV32 SNORD77.4-201ENST00000516158 81 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 RNA5SP480-201ENST00000516840 109 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC71Q8IV32 MIR4662B-201ENST00000579498 81 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 AC006006.1-201ENST00000603082 144 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 AL049861.1-201ENST00000603130 150 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.91□□□□□ -2.26
CCDC71Q8IV32 Y_RNA.24-201ENST00000362508 103 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.149-201ENST00000363558 117 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 RNA5SP48-201ENST00000363969 126 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 SNORA1.2-201ENST00000365189 134 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 AC063976.4-201ENST00000421971 163 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 AC002429.1-201ENST00000437672 148 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC71Q8IV32 RNU7-21P-201ENST00000459430 62 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC71Q8IV32 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.9□□□□□ -2.27
CCDC71Q8IV32 RNU4-57P-201ENST00000515980 135 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 RNU6-126P-201ENST00000516685 103 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 MIR4282-201ENST00000583613 67 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 AL360085.1-201ENST00000604713 532 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.27
CCDC71Q8IV32 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC71Q8IV32 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.540-201ENST00000384638 111 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 RNU6-1067P-201ENST00000384752 107 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 SNORD28B-201ENST00000390993 75 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC71Q8IV32 RNA5SP436-201ENST00000516020 115 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 RNU6-327P-201ENST00000516270 127 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 RNU11-2P-201ENST00000516898 142 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.89□□□□□ -2.27
CCDC71Q8IV32 AC100767.1-201ENST00000528178 123 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.89□□□□□ -2.27
CCDC71Q8IV32 AC015726.2-201ENST00000620112 122 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 AC008133.2-201ENST00000624540 351 ntBASIC0.89□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.229-201ENST00000364347 113 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 RNU4-10P-201ENST00000364383 140 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.352-201ENST00000365439 102 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.370-201ENST00000365589 108 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.537-201ENST00000384626 109 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 SNORA75.2-201ENST00000391138 150 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.587-201ENST00000391210 103 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 SNORA75.3-201ENST00000391231 150 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.590-201ENST00000410140 107 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC71Q8IV32 RNU7-90P-201ENST00000459216 62 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 AC211469.2-201ENST00000605461 205 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.88□□□□□ -2.27
CCDC71Q8IV32 PVT1_3.1-201ENST00000620853 95 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 MIR4251-201ENST00000635819 61 ntBASIC0.88□□□□□ -2.27
CCDC71Q8IV32 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC71Q8IV32 MIR103A2-201ENST00000362154 78 ntBASIC0.87□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.133-201ENST00000363428 110 ntBASIC0.87□□□□□ -2.27
CCDC71Q8IV32 Y_RNA.396-201ENST00000383949 103 ntBASIC0.87□□□□□ -2.27
CCDC71Q8IV32 RNY3P5-201ENST00000384127 102 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms