Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.78□□□□□ -2.12
NKX6-1P78426 MIR3935-201ENST00000583472 104 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 MIR4781-201ENST00000585250 76 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 AL513534.2-201ENST00000603836 250 ntBASIC1.78□□□□□ -2.12
NKX6-1P78426 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NKX6-1P78426 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.78□□□□□ -2.13
NKX6-1P78426 Y_RNA.464-201ENST00000384282 110 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 Y_RNA.508-201ENST00000384502 114 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 RNU6-1065P-201ENST00000384513 106 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 MIR653-201ENST00000385279 96 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 MIR934-201ENST00000401241 83 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 AL021397.1-201ENST00000451806 248 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 RNU6-917P-201ENST00000516294 104 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 MIR4422-201ENST00000581938 83 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 AC134878.1-201ENST00000619901 243 ntBASIC1.77□□□□□ -2.13
NKX6-1P78426 AP000648.3-201ENST00000623539 4507 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 SNORA1.2-201ENST00000365189 134 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 Y_RNA.542-201ENST00000384641 111 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 RNU6-1067P-201ENST00000384752 107 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 MIR548I3-201ENST00000408378 149 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 MIR548I1-201ENST00000408810 149 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 AC108667.1-201ENST00000428618 249 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 AC087499.4-201ENST00000448505 178 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 AC092991.1-201ENST00000477176 376 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 RN7SL274P-201ENST00000492268 272 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 RNA5SP182-201ENST00000516064 82 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 MIR3937-201ENST00000580135 106 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 AC104465.1-201ENST00000611365 139 ntBASIC1.76□□□□□ -2.13
NKX6-1P78426 RNU6-978P-201ENST00000364371 103 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 RNU6-597P-201ENST00000365620 102 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 Y_RNA.393-201ENST00000383936 102 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 Y_RNA.466-201ENST00000384294 113 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 MIR518F-201ENST00000384973 87 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 RNU1-78P-201ENST00000391248 165 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 U8.17-201ENST00000391292 132 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 AL445685.2-201ENST00000422551 342 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.75□□□□□ -2.13
NKX6-1P78426 RNA5SP445-201ENST00000515889 115 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 SNORA18.7-201ENST00000516910 131 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 DNAJC19P2-201ENST00000593340 302 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 AL365434.2-201ENST00000607979 234 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 MIR6844-201ENST00000637122 62 ntBASIC1.75□□□□□ -2.13
NKX6-1P78426 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NKX6-1P78426 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
NKX6-1P78426 MIR302D-201ENST00000362275 68 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 MIR337-201ENST00000362281 93 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 RNU6-449P-201ENST00000383914 107 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 Y_RNA.410-201ENST00000383992 113 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 MIR548A2-201ENST00000384956 97 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 RNU6-394P-201ENST00000410735 107 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.74□□□□□ -2.13
NKX6-1P78426 AC245517.4-201ENST00000448601 281 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 AC107297.1-201ENST00000459991 176 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 SNORA18.4-201ENST00000516440 124 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 RNU7-121P-201ENST00000516604 62 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 MIR3646-201ENST00000578301 84 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 AL357312.1-201ENST00000603879 298 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 Y_RNA.783-201ENST00000613546 102 ntBASIC1.74□□□□□ -2.13
NKX6-1P78426 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NKX6-1P78426 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NKX6-1P78426 Y_RNA.37-201ENST00000362606 108 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 SNORD37.2-201ENST00000391075 66 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 SNORD123-201ENST00000459473 70 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 RNU6-922P-201ENST00000516753 99 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 SNORA74.3-201ENST00000517108 154 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 AC019176.1-201ENST00000518519 225 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 AC007751.1-201ENST00000529260 376 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 MIR3144-201ENST00000579460 79 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 AL365205.2-201ENST00000594586 68 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 snoU13.31-201ENST00000607291 104 ntBASIC1.73□□□□□ -2.13
NKX6-1P78426 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
NKX6-1P78426 MIR378A-201ENST00000362177 66 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 Y_RNA.8-201ENST00000362353 102 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 RNU6-1292P-201ENST00000383856 107 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 RNU6-768P-201ENST00000384683 107 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 Y_RNA.580-201ENST00000391004 95 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.72□□□□□ -2.13
NKX6-1P78426 RNU4-57P-201ENST00000515980 135 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 MIR3129-201ENST00000581095 76 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
NKX6-1P78426 AC012493.3-201ENST00000604494 112 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 GHRLOS.1-201ENST00000610995 70 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 MTND1P7-201ENST00000632801 297 ntBASIC1.72□□□□□ -2.13
NKX6-1P78426 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
NKX6-1P78426 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
NKX6-1P78426 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
NKX6-1P78426 Y_RNA.370-201ENST00000365589 108 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 RNU6-1189P-201ENST00000383958 107 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 SNORA1-201ENST00000384107 130 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 RNU6-804P-201ENST00000384286 107 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 SNORA75.5-201ENST00000391291 81 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 RNA5SP127-201ENST00000411051 133 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 AF228730.3-201ENST00000436691 102 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 AC027119.1-201ENST00000440877 241 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 RNU7-43P-201ENST00000516554 64 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 RNU7-181P-201ENST00000517234 74 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 MIR5089-201ENST00000580047 84 ntBASIC1.71□□□□□ -2.14
NKX6-1P78426 AL442644.1-201ENST00000454390 3105 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms