Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 SCARNA23-201ENST00000516060 130 ntBASIC2.63□□□□□ -1.99
SRFP11831 SNORA9.3-201ENST00000516383 129 ntBASIC2.63□□□□□ -1.99
SRFP11831 RNU6-548P-201ENST00000517083 115 ntBASIC2.63□□□□□ -1.99
SRFP11831 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.63□□□□□ -1.99
SRFP11831 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.63□□□□□ -1.99
SRFP11831 MIR3169-201ENST00000578032 83 ntBASIC2.63□□□□□ -1.99
SRFP11831 MIR4305-201ENST00000583252 102 ntBASIC2.63□□□□□ -1.99
SRFP11831 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
SRFP11831 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SRFP11831 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.63□□□□□ -1.99
SRFP11831 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
SRFP11831 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.62□□□□□ -1.99
SRFP11831 Z96811.1-201ENST00000445880 108 ntBASIC2.62□□□□□ -1.99
SRFP11831 RNA5SP57-201ENST00000459463 123 ntBASIC2.62□□□□□ -1.99
SRFP11831 RNU7-61P-201ENST00000515897 61 ntBASIC2.62□□□□□ -1.99
SRFP11831 RNU2-13P-201ENST00000515909 113 ntBASIC2.62□□□□□ -1.99
SRFP11831 RNU2-35P-201ENST00000516446 142 ntBASIC2.62□□□□□ -1.99
SRFP11831 AC245166.1-201ENST00000521012 253 ntBASIC2.62□□□□□ -1.99
SRFP11831 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.62□□□□□ -1.99
SRFP11831 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.62□□□□□ -1.99
SRFP11831 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SRFP11831 RNU6-228P-201ENST00000362700 106 ntBASIC2.61□□□□□ -1.99
SRFP11831 Y_RNA.290-201ENST00000364879 114 ntBASIC2.61□□□□□ -1.99
SRFP11831 RNA5SP109-201ENST00000391010 116 ntBASIC2.61□□□□□ -1.99
SRFP11831 RNU6-482P-201ENST00000391068 107 ntBASIC2.61□□□□□ -1.99
SRFP11831 AC022137.1-201ENST00000483735 151 ntBASIC2.61□□□□□ -1.99
SRFP11831 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.61□□□□□ -1.99
SRFP11831 AP003484.1-201ENST00000530974 250 ntBASIC2.61□□□□□ -1.99
SRFP11831 AC022254.1-201ENST00000567857 235 ntBASIC2.61□□□□□ -1.99
SRFP11831 MIR4778-201ENST00000577635 80 ntBASIC2.61□□□□□ -1.99
SRFP11831 SNORA28-201ENST00000606769 126 ntBASIC2.61□□□□□ -1.99
SRFP11831 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SRFP11831 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SRFP11831 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
SRFP11831 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SRFP11831 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SRFP11831 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SRFP11831 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
SRFP11831 RNY1P1-201ENST00000364372 112 ntBASIC2.6□□□□□ -1.99
SRFP11831 RNU1-91P-201ENST00000364746 163 ntBASIC2.6□□□□□ -1.99
SRFP11831 RNU6-497P-201ENST00000365316 104 ntBASIC2.6□□□□□ -1.99
SRFP11831 SNORD38C-201ENST00000384381 69 ntBASIC2.6□□□□□ -1.99
SRFP11831 RNU6-163P-201ENST00000384396 106 ntBASIC2.6□□□□□ -1.99
SRFP11831 MIR29C-201ENST00000385231 88 ntBASIC2.6□□□□□ -1.99
SRFP11831 MIR1912-201ENST00000410389 80 ntBASIC2.6□□□□□ -1.99
SRFP11831 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.6□□□□□ -1.99
SRFP11831 SNRPGP14-201ENST00000435400 219 ntBASIC2.6□□□□□ -1.99
SRFP11831 AL606517.2-201ENST00000442855 241 ntBASIC2.6□□□□□ -1.99
SRFP11831 STAG3L5P-204ENST00000443759 179 ntBASIC2.6□□□□□ -1.99
SRFP11831 AC104389.3-201ENST00000445629 235 ntBASIC2.6□□□□□ -1.99
SRFP11831 AC087499.4-201ENST00000448505 178 ntBASIC2.6□□□□□ -1.99
SRFP11831 RNU7-80P-201ENST00000459562 61 ntBASIC2.6□□□□□ -1.99
SRFP11831 RNU6-795P-201ENST00000516323 103 ntBASIC2.6□□□□□ -1.99
SRFP11831 AC005786.1-201ENST00000588553 154 ntBASIC2.6□□□□□ -1.99
SRFP11831 AC002984.1-201ENST00000591692 448 ntBASIC2.6□□□□□ -1.99
SRFP11831 IGLL4P-201ENST00000614590 133 ntBASIC2.6□□□□□ -1.99
SRFP11831 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -1.99
SRFP11831 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
SRFP11831 Y_RNA.155-201ENST00000363632 101 ntBASIC2.59□□□□□ -1.99
SRFP11831 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
SRFP11831 Y_RNA.440-201ENST00000384120 114 ntBASIC2.59□□□□□ -1.99
SRFP11831 Y_RNA.454-201ENST00000384224 113 ntBASIC2.59□□□□□ -1.99
SRFP11831 AL359511.1-201ENST00000402970 211 ntBASIC2.59□□□□□ -1.99
SRFP11831 MIR1255A-201ENST00000408338 113 ntBASIC2.59□□□□□ -1.99
SRFP11831 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.59□□□□□ -1.99
SRFP11831 RNA5SP492-201ENST00000411330 114 ntBASIC2.59□□□□□ -1.99
SRFP11831 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.59□□□□□ -1.99
SRFP11831 AC113410.1-201ENST00000505029 247 ntBASIC2.59□□□□□ -1.99
SRFP11831 AC234781.5-201ENST00000508429 271 ntBASIC2.59□□□□□ -1.99
SRFP11831 MIR1273D-201ENST00000577266 86 ntBASIC2.59□□□□□ -1.99
SRFP11831 MIR3126-201ENST00000577443 74 ntBASIC2.59□□□□□ -1.99
SRFP11831 AC091932.4-201ENST00000623386 200 ntBASIC2.59□□□□□ -1.99
SRFP11831 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.59□□□□□ -2
SRFP11831 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
SRFP11831 RNU1-58P-201ENST00000362413 163 ntBASIC2.58□□□□□ -2
SRFP11831 Y_RNA.73-201ENST00000362910 113 ntBASIC2.58□□□□□ -2
SRFP11831 SNORD56.5-201ENST00000364281 72 ntBASIC2.58□□□□□ -2
SRFP11831 Y_RNA.507-201ENST00000384500 99 ntBASIC2.58□□□□□ -2
SRFP11831 RNU6-644P-201ENST00000391155 98 ntBASIC2.58□□□□□ -2
SRFP11831 RNA5SP344-201ENST00000411081 104 ntBASIC2.58□□□□□ -2
SRFP11831 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.58□□□□□ -2
SRFP11831 AC092427.1-202ENST00000430569 476 ntBASIC2.58□□□□□ -2
SRFP11831 RPS29P6-201ENST00000438196 145 ntBASIC2.58□□□□□ -2
SRFP11831 AC069114.2-201ENST00000604699 304 ntBASIC2.58□□□□□ -2
SRFP11831 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.58□□□□□ -2
SRFP11831 MIR8054-201ENST00000620877 86 ntBASIC2.58□□□□□ -2
SRFP11831 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
SRFP11831 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.58□□□□□ -2
SRFP11831 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SRFP11831 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
SRFP11831 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SRFP11831 MAPK10-266ENST00000641066 6555 ntBASIC2.57□□□□□ -2
SRFP11831 RNU6-1019P-201ENST00000364424 107 ntBASIC2.57□□□□□ -2
SRFP11831 U8.9-201ENST00000365667 134 ntBASIC2.57□□□□□ -2
SRFP11831 RNU6-938P-201ENST00000411285 103 ntBASIC2.57□□□□□ -2
SRFP11831 UBBP3-201ENST00000445497 241 ntBASIC2.57□□□□□ -2
SRFP11831 RPL39P39-201ENST00000455840 151 ntBASIC2.57□□□□□ -2
SRFP11831 AC114811.1-201ENST00000507207 168 ntBASIC2.57□□□□□ -2
SRFP11831 FAM71BP1-201ENST00000604431 523 ntBASIC2.57□□□□□ -2
SRFP11831 U7.3-201ENST00000616123 62 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms