Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU1-133P-201ENST00000364867 167 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 MIR802-201ENST00000390235 94 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6-816P-201ENST00000390914 107 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6-1268P-201ENST00000391214 107 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6-1239P-201ENST00000391310 107 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 AL049830.1-201ENST00000468034 425 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 Y_RNA.714-201ENST00000517065 90 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 MIR3163-201ENST00000581592 73 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 MIR4305-201ENST00000583252 102 ntBASIC3.35□□□□□ -1.87
CSB-PGBD3P0DP91 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6-228P-201ENST00000362700 106 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 RNY3P2-201ENST00000362918 102 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 RNU11-3P-201ENST00000391111 133 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 RNA5SP225-201ENST00000410874 135 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 AL445646.1-201ENST00000431784 216 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 AC234781.5-201ENST00000508429 271 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 SCARNA23-201ENST00000516060 130 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 RNU7-70P-201ENST00000516941 66 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 DEFB131E-201ENST00000532329 154 ntBASIC3.34□□□□□ -1.87
CSB-PGBD3P0DP91 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.34□□□□□ -1.88
CSB-PGBD3P0DP91 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CSB-PGBD3P0DP91 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
CSB-PGBD3P0DP91 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSB-PGBD3P0DP91 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CSB-PGBD3P0DP91 Y_RNA.17-201ENST00000362433 111 ntBASIC3.33□□□□□ -1.88
CSB-PGBD3P0DP91 SNORD68-201ENST00000363214 84 ntBASIC3.33□□□□□ -1.88
CSB-PGBD3P0DP91 Y_RNA.290-201ENST00000364879 114 ntBASIC3.33□□□□□ -1.88
CSB-PGBD3P0DP91 MIR597-201ENST00000384968 97 ntBASIC3.33□□□□□ -1.88
CSB-PGBD3P0DP91 AP002004.2-201ENST00000531656 154 ntBASIC3.33□□□□□ -1.88
CSB-PGBD3P0DP91 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.33□□□□□ -1.88
CSB-PGBD3P0DP91 RNU4-16P-201ENST00000364737 141 ntBASIC3.32□□□□□ -1.88
CSB-PGBD3P0DP91 RNU6-442P-201ENST00000383968 104 ntBASIC3.32□□□□□ -1.88
CSB-PGBD3P0DP91 MIR1289-2-201ENST00000408360 111 ntBASIC3.32□□□□□ -1.88
CSB-PGBD3P0DP91 RNU7-6P-201ENST00000516845 62 ntBASIC3.32□□□□□ -1.88
CSB-PGBD3P0DP91 AC069114.2-201ENST00000604699 304 ntBASIC3.32□□□□□ -1.88
CSB-PGBD3P0DP91 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.32□□□□□ -1.88
CSB-PGBD3P0DP91 ICE2P2-201ENST00000483823 2787 ntBASIC3.32□□□□□ -1.88
CSB-PGBD3P0DP91 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
CSB-PGBD3P0DP91 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 SNORD14E-201ENST00000364009 85 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 RNU4-36P-201ENST00000364294 144 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 Y_RNA.351-201ENST00000365436 96 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 MIR518A2-201ENST00000384966 87 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 AL359511.1-201ENST00000402970 211 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 RN7SKP123-201ENST00000410732 291 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 AC015726.2-201ENST00000620112 122 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 AC091932.4-201ENST00000623386 200 ntBASIC3.31□□□□□ -1.88
CSB-PGBD3P0DP91 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 RNU6-1099P-201ENST00000363533 107 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 RNU1-109P-201ENST00000383960 147 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 RNU6-1124P-201ENST00000384169 107 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 HMGN2P39-201ENST00000398005 273 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 MIR1283-2-201ENST00000408621 87 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 MIR1912-201ENST00000410389 80 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 AL356320.1-201ENST00000429616 163 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 snoU13.23-201ENST00000458863 104 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 AC113410.1-201ENST00000505029 247 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 MIR5094-201ENST00000578766 85 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 MIR4762-201ENST00000585261 75 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 AC025521.1-201ENST00000621624 286 ntBASIC3.3□□□□□ -1.88
CSB-PGBD3P0DP91 RNA5SP210-201ENST00000391034 120 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 RNA5SP465-201ENST00000391195 109 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 RNU6-972P-201ENST00000391208 107 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 HMGN2P3-201ENST00000433603 273 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 HMGN2P5-201ENST00000436882 273 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 RN7SL297P-201ENST00000483161 293 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 RNU7-61P-201ENST00000515897 61 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 AP003484.1-201ENST00000530974 250 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 MIR3683-201ENST00000580847 82 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 FAM71BP1-201ENST00000604431 523 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 SNORD14A-201ENST00000606526 91 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 AC087741.2-201ENST00000619415 172 ntBASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CSB-PGBD3P0DP91 RNU6-1084P-201ENST00000362498 107 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 RNU6-1019P-201ENST00000364424 107 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 U8.5-201ENST00000364528 136 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 Y_RNA.531-201ENST00000384589 121 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 MIR764-201ENST00000390811 85 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 RNA5SP270-201ENST00000411361 118 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 AC245047.3-201ENST00000429428 127 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 SNORA31.4-201ENST00000516049 129 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 SNORA18.7-201ENST00000516910 131 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 AC046143.2-201ENST00000609789 160 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 MIR1255B1-201ENST00000636325 63 ntBASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CSB-PGBD3P0DP91 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 RNU6-644P-201ENST00000391155 98 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 AL591806.2-201ENST00000433122 173 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 AL606517.2-201ENST00000442855 241 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 AC022137.1-201ENST00000483735 151 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 RNU6-795P-201ENST00000516323 103 ntBASIC3.27□□□□□ -1.89
CSB-PGBD3P0DP91 RNA5SP395-201ENST00000516567 118 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms