Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 RNU6-833P-201ENST00000363486 107 ntBASIC2.43□□□□□ -2.02
SYPP08247 Y_RNA.298-201ENST00000364960 107 ntBASIC2.43□□□□□ -2.02
SYPP08247 Y_RNA.454-201ENST00000384224 113 ntBASIC2.43□□□□□ -2.02
SYPP08247 HMGN2P39-201ENST00000398005 273 ntBASIC2.43□□□□□ -2.02
SYPP08247 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.43□□□□□ -2.02
SYPP08247 AC015922.2-201ENST00000435593 184 ntBASIC2.43□□□□□ -2.02
SYPP08247 RNA5SP168-201ENST00000516642 112 ntBASIC2.43□□□□□ -2.02
SYPP08247 AC015712.3-201ENST00000559380 164 ntBASIC2.43□□□□□ -2.02
SYPP08247 MIR3670-2-201ENST00000582974 65 ntBASIC2.43□□□□□ -2.02
SYPP08247 MIR3670-1-201ENST00000584160 65 ntBASIC2.43□□□□□ -2.02
SYPP08247 MIR3670-3-201ENST00000584855 65 ntBASIC2.43□□□□□ -2.02
SYPP08247 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.43□□□□□ -2.02
SYPP08247 MIR3670-4-201ENST00000612260 65 ntBASIC2.43□□□□□ -2.02
SYPP08247 AC009831.4-201ENST00000620744 325 ntBASIC2.43□□□□□ -2.02
SYPP08247 AL596211.1-201ENST00000569873 2277 ntBASIC2.43□□□□□ -2.02
SYPP08247 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
SYPP08247 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SYPP08247 RNU6-1255P-201ENST00000363434 112 ntBASIC2.42□□□□□ -2.02
SYPP08247 Y_RNA.213-201ENST00000364178 111 ntBASIC2.42□□□□□ -2.02
SYPP08247 RNU6-1031P-201ENST00000384773 107 ntBASIC2.42□□□□□ -2.02
SYPP08247 MT-TI-201ENST00000387365 69 ntBASIC2.42□□□□□ -2.02
SYPP08247 SNORA48.1-201ENST00000390879 135 ntBASIC2.42□□□□□ -2.02
SYPP08247 RNU6-482P-201ENST00000391068 107 ntBASIC2.42□□□□□ -2.02
SYPP08247 U8.17-201ENST00000391292 132 ntBASIC2.42□□□□□ -2.02
SYPP08247 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.42□□□□□ -2.02
SYPP08247 SUMO2P16-201ENST00000519475 264 ntBASIC2.42□□□□□ -2.02
SYPP08247 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.42□□□□□ -2.02
SYPP08247 SUB1P4-201ENST00000566062 339 ntBASIC2.42□□□□□ -2.02
SYPP08247 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.42□□□□□ -2.02
SYPP08247 RNY4P6-201ENST00000363667 96 ntBASIC2.41□□□□□ -2.02
SYPP08247 SNORA27-201ENST00000384323 126 ntBASIC2.41□□□□□ -2.02
SYPP08247 AL591806.2-201ENST00000433122 173 ntBASIC2.41□□□□□ -2.02
SYPP08247 RNU7-164P-201ENST00000459221 62 ntBASIC2.41□□□□□ -2.02
SYPP08247 RNU7-123P-201ENST00000515911 60 ntBASIC2.41□□□□□ -2.02
SYPP08247 SCARNA16.3-201ENST00000516595 184 ntBASIC2.41□□□□□ -2.02
SYPP08247 MIR4305-201ENST00000583252 102 ntBASIC2.41□□□□□ -2.02
SYPP08247 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.41□□□□□ -2.02
SYPP08247 MIR6873-201ENST00000622788 63 ntBASIC2.41□□□□□ -2.02
SYPP08247 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SYPP08247 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
SYPP08247 Y_RNA.163-201ENST00000363702 113 ntBASIC2.4□□□□□ -2.03
SYPP08247 RNA5SP456-201ENST00000364002 114 ntBASIC2.4□□□□□ -2.03
SYPP08247 Y_RNA.241-201ENST00000364470 117 ntBASIC2.4□□□□□ -2.03
SYPP08247 Y_RNA.362-201ENST00000365518 110 ntBASIC2.4□□□□□ -2.03
SYPP08247 Y_RNA.494-201ENST00000384432 111 ntBASIC2.4□□□□□ -2.03
SYPP08247 MIR520A-201ENST00000384862 85 ntBASIC2.4□□□□□ -2.03
SYPP08247 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SYPP08247 RPS29P24-201ENST00000486345 171 ntBASIC2.4□□□□□ -2.03
SYPP08247 RNA5SP281-201ENST00000516504 135 ntBASIC2.4□□□□□ -2.03
SYPP08247 RNA5SP437-201ENST00000517249 129 ntBASIC2.4□□□□□ -2.03
SYPP08247 MIR4778-201ENST00000577635 80 ntBASIC2.4□□□□□ -2.03
SYPP08247 MIR3683-201ENST00000580847 82 ntBASIC2.4□□□□□ -2.03
SYPP08247 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
SYPP08247 AC078899.2-201ENST00000595282 212 ntBASIC2.4□□□□□ -2.03
SYPP08247 HSPE1P19-201ENST00000603327 295 ntBASIC2.4□□□□□ -2.03
SYPP08247 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SYPP08247 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
SYPP08247 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SYPP08247 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.39□□□□□ -2.03
SYPP08247 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SYPP08247 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SYPP08247 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SYPP08247 AL589743.1-201ENST00000551932 2712 ntBASIC2.39□□□□□ -2.03
SYPP08247 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-34-201ENST00000362441 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-12-201ENST00000362583 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-29-201ENST00000362834 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-9-201ENST00000362912 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-21-201ENST00000362963 81 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-14-201ENST00000363090 81 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-13-201ENST00000363358 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORA63.5-201ENST00000363548 123 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-41-201ENST00000363608 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-11-201ENST00000363616 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-5-201ENST00000363633 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-39-201ENST00000363694 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-4-201ENST00000363810 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-16-201ENST00000363887 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-6-201ENST00000363942 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-42-201ENST00000364273 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-15-201ENST00000364809 81 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-1-201ENST00000364961 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-26-201ENST00000365067 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-10-201ENST00000365073 81 ntBASIC2.39□□□□□ -2.03
SYPP08247 Y_RNA.323-201ENST00000365157 109 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-43-201ENST00000365503 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-36-201ENST00000365629 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 RNU6-1014P-201ENST00000383940 103 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNX2P2-201ENST00000424553 323 ntBASIC2.39□□□□□ -2.03
SYPP08247 SUMO1P4-201ENST00000429430 302 ntBASIC2.39□□□□□ -2.03
SYPP08247 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
SYPP08247 RNU6-998P-201ENST00000515894 101 ntBASIC2.39□□□□□ -2.03
SYPP08247 RNU7-12P-201ENST00000516030 62 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORA31.4-201ENST00000516049 129 ntBASIC2.39□□□□□ -2.03
SYPP08247 Y_RNA.694-201ENST00000516677 117 ntBASIC2.39□□□□□ -2.03
SYPP08247 AC090821.2-201ENST00000523552 176 ntBASIC2.39□□□□□ -2.03
SYPP08247 SNORD115-40-201ENST00000606510 82 ntBASIC2.39□□□□□ -2.03
SYPP08247 RNU6-94P-201ENST00000607728 107 ntBASIC2.39□□□□□ -2.03
SYPP08247 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
SYPP08247 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 387.7 ms