Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 RNU2-19P-201ENST00000517288 84 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 SNORA4-201ENST00000584302 138 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 AL365205.2-201ENST00000594586 68 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
TOP3BO95985 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.97□□□□□ -2.09
TOP3BO95985 MIR624-201ENST00000385217 97 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 SNORD72-201ENST00000390994 80 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 AL445685.2-201ENST00000422551 342 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.97□□□□□ -2.09
TOP3BO95985 AL158147.1-201ENST00000443970 75 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.97□□□□□ -2.09
TOP3BO95985 RPS26P45-201ENST00000471748 340 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 AC055731.1-201ENST00000474387 401 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 SNORA18.4-201ENST00000516440 124 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 AL358944.1-201ENST00000528537 144 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 BX248123.2-201ENST00000606318 124 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 MIR3914-2-201ENST00000637339 95 ntBASIC1.97□□□□□ -2.09
TOP3BO95985 Y_RNA.52-201ENST00000362760 96 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 Y_RNA.114-201ENST00000363265 113 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 SNORD18B-201ENST00000365659 72 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 MIR515-2-201ENST00000384883 83 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 MIR515-1-201ENST00000384884 83 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 RNA5SP323-201ENST00000391094 133 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 AL603914.1-201ENST00000401964 204 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 RNU6-1064P-201ENST00000410626 104 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 RNA5SP127-201ENST00000411051 133 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.96□□□□□ -2.1
TOP3BO95985 AC099677.2-201ENST00000436385 175 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 RNU6-504P-201ENST00000516568 104 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 Y_RNA.690-201ENST00000516603 95 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 MIR514B-201ENST00000516774 80 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 RNA5SP480-201ENST00000516840 109 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 MIR3121-201ENST00000579680 77 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 AC008507.4-201ENST00000585464 127 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 MIR8081-201ENST00000611533 95 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 AC022513.1-201ENST00000624512 117 ntBASIC1.96□□□□□ -2.1
TOP3BO95985 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
TOP3BO95985 SNORA1B-201ENST00000362535 133 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 SNORA1-201ENST00000384107 130 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 SNORA8-201ENST00000384574 139 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 RNU6-429P-201ENST00000384582 108 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 RNU6-476P-201ENST00000384726 107 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 AC024995.1-201ENST00000523014 93 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 MIR3129-201ENST00000581095 76 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 MIR4303-201ENST00000581299 66 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 AL591926.4-201ENST00000616895 298 ntBASIC1.95□□□□□ -2.1
TOP3BO95985 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TOP3BO95985 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TOP3BO95985 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TOP3BO95985 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.94□□□□□ -2.1
TOP3BO95985 MIR126-201ENST00000362291 85 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 RNU6-508P-201ENST00000363231 103 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 RNU6-309P-201ENST00000364573 106 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 RNU6-1144P-201ENST00000384247 104 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 SNORD61-201ENST00000384252 73 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 SNORA40.5-201ENST00000391061 128 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 MIR891A-201ENST00000401237 79 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.94□□□□□ -2.1
TOP3BO95985 RNU7-94P-201ENST00000459576 63 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 RNA5SP182-201ENST00000516064 82 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 RNU6-1270P-201ENST00000517128 108 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 AP002004.2-201ENST00000531656 154 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 AC087685.1-201ENST00000587507 141 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 MIR6129-201ENST00000616087 109 ntBASIC1.94□□□□□ -2.1
TOP3BO95985 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
TOP3BO95985 RNU6-888P-201ENST00000363010 101 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 SNORD24-201ENST00000383884 75 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 MIR522-201ENST00000385071 87 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TOP3BO95985 AL049830.1-201ENST00000468034 425 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.93□□□□□ -2.1
TOP3BO95985 AL163195.1-201ENST00000496941 348 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 RNU5E-3P-201ENST00000515913 68 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 Y_RNA.666-201ENST00000516187 112 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 SNORA25.15-201ENST00000516487 89 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 RNU6-1061P-201ENST00000516530 99 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 AC133485.4-201ENST00000561835 220 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 AC138907.4-201ENST00000570107 226 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 MIR5094-201ENST00000578766 85 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 U6.95-201ENST00000636931 70 ntBASIC1.93□□□□□ -2.1
TOP3BO95985 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
TOP3BO95985 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
TOP3BO95985 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.92□□□□□ -2.1
TOP3BO95985 AC008555.8-201ENST00000623602 2168 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 RNU6-647P-201ENST00000364243 107 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 RNU6-153P-201ENST00000364422 104 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 RNU6-1292P-201ENST00000383856 107 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 MIR548A2-201ENST00000384956 97 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 RNA5SP450-201ENST00000411206 102 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 Y_RNA.630-201ENST00000411370 108 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 FTH1P12-201ENST00000432137 551 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 RNA5SP233-201ENST00000459153 113 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.92□□□□□ -2.1
TOP3BO95985 RNVU1-2-201ENST00000516326 135 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 MTND5P34-201ENST00000568888 325 ntBASIC1.92□□□□□ -2.1
TOP3BO95985 AC069114.2-201ENST00000604699 304 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms