Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 Y_RNA.229-201ENST00000364347 113 ntBASIC1.37□□□□□ -2.19
CSPG5O95196 RNY4P28-201ENST00000365281 93 ntBASIC1.37□□□□□ -2.19
CSPG5O95196 MIR626-201ENST00000385032 94 ntBASIC1.37□□□□□ -2.19
CSPG5O95196 SNORD72-201ENST00000390994 80 ntBASIC1.37□□□□□ -2.19
CSPG5O95196 MIR891A-201ENST00000401237 79 ntBASIC1.37□□□□□ -2.19
CSPG5O95196 AL160236.1-201ENST00000556317 195 ntBASIC1.37□□□□□ -2.19
CSPG5O95196 AL021707.8-201ENST00000609428 183 ntBASIC1.37□□□□□ -2.19
CSPG5O95196 snoU2_19.4-201ENST00000364329 80 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 Y_RNA.262-201ENST00000364641 102 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 snoU2-30.1-201ENST00000365012 70 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 Y_RNA.540-201ENST00000384638 111 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 Y_RNA.626-201ENST00000411288 95 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 RNU4-71P-201ENST00000516258 113 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 RNU6-388P-201ENST00000517012 105 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 RNU6-389P-201ENST00000517048 105 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 Y_RNA.714-201ENST00000517065 90 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 AL513534.2-201ENST00000603836 250 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 PVT1_3.1-201ENST00000620853 95 ntBASIC1.36□□□□□ -2.19
CSPG5O95196 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CSPG5O95196 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CSPG5O95196 RNU6-833P-201ENST00000363486 107 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 RNU1-93P-201ENST00000364704 169 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 RNU6-923P-201ENST00000364753 107 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 Y_RNA.308-201ENST00000365043 101 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 MT-TT-201ENST00000387460 66 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 RNA5SP496-201ENST00000391240 109 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 RNU6-493P-201ENST00000391321 108 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.35□□□□□ -2.19
CSPG5O95196 AC245047.8-201ENST00000456455 284 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 SCARNA8-201ENST00000515924 131 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 RNA5SP436-201ENST00000516020 115 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 RNU6-453P-201ENST00000516819 85 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 AC008507.4-201ENST00000585464 127 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.35□□□□□ -2.19
CSPG5O95196 AC078938.1-201ENST00000620993 318 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 AC027279.3-201ENST00000625055 122 ntBASIC1.35□□□□□ -2.19
CSPG5O95196 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CSPG5O95196 RNA5SP327-201ENST00000362494 101 ntBASIC1.34□□□□□ -2.19
CSPG5O95196 SNORD14E-201ENST00000364009 85 ntBASIC1.34□□□□□ -2.19
CSPG5O95196 RNU4-17P-201ENST00000365598 141 ntBASIC1.34□□□□□ -2.19
CSPG5O95196 MIR526A1-201ENST00000384897 85 ntBASIC1.34□□□□□ -2.19
CSPG5O95196 MT-TG-201ENST00000387429 68 ntBASIC1.34□□□□□ -2.19
CSPG5O95196 Y_RNA.587-201ENST00000391210 103 ntBASIC1.34□□□□□ -2.19
CSPG5O95196 RPL39P39-201ENST00000455840 151 ntBASIC1.34□□□□□ -2.19
CSPG5O95196 RNU6-917P-201ENST00000516294 104 ntBASIC1.34□□□□□ -2.19
CSPG5O95196 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.34□□□□□ -2.19
CSPG5O95196 uc_338.4-201ENST00000616635 176 ntBASIC1.34□□□□□ -2.19
CSPG5O95196 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
CSPG5O95196 Y_RNA.476-201ENST00000384347 108 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 MIR516B2-201ENST00000385190 85 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 MIR802-201ENST00000390235 94 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 RNU6-381P-201ENST00000391259 108 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 MIR1298-201ENST00000408783 112 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 AC023449.1-201ENST00000454464 154 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 RNU7-149P-201ENST00000516739 59 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 MIR5688-201ENST00000580619 83 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 MIR151B-201ENST00000584249 96 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 AC087685.1-201ENST00000587507 141 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 GHRLOS.1-201ENST00000610995 70 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 MIR6767-201ENST00000637302 66 ntBASIC1.33□□□□□ -2.2
CSPG5O95196 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CSPG5O95196 Y_RNA.199-201ENST00000364014 102 ntBASIC1.32□□□□□ -2.2
CSPG5O95196 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.32□□□□□ -2.2
CSPG5O95196 MIR548J-201ENST00000408833 112 ntBASIC1.32□□□□□ -2.2
CSPG5O95196 HMGN2P32-201ENST00000444648 269 ntBASIC1.32□□□□□ -2.2
CSPG5O95196 RNU6-1007P-201ENST00000516586 107 ntBASIC1.32□□□□□ -2.2
CSPG5O95196 AC130289.1-201ENST00000577321 73 ntBASIC1.32□□□□□ -2.2
CSPG5O95196 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
CSPG5O95196 AL357312.1-201ENST00000603879 298 ntBASIC1.32□□□□□ -2.2
CSPG5O95196 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
CSPG5O95196 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CSPG5O95196 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CSPG5O95196 Y_RNA.200-201ENST00000364018 102 ntBASIC1.31□□□□□ -2.2
CSPG5O95196 SNORA2.2-201ENST00000365473 135 ntBASIC1.31□□□□□ -2.2
CSPG5O95196 MIR452-201ENST00000385020 85 ntBASIC1.31□□□□□ -2.2
CSPG5O95196 MIR616-201ENST00000385293 97 ntBASIC1.31□□□□□ -2.2
CSPG5O95196 Y_RNA.622-201ENST00000411091 108 ntBASIC1.31□□□□□ -2.2
CSPG5O95196 AC090142.3-201ENST00000519012 385 ntBASIC1.31□□□□□ -2.2
CSPG5O95196 AC090049.2-201ENST00000550377 109 ntBASIC1.31□□□□□ -2.2
CSPG5O95196 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.31□□□□□ -2.2
CSPG5O95196 MIR4308-201ENST00000580634 81 ntBASIC1.31□□□□□ -2.2
CSPG5O95196 AC009779.6-201ENST00000603972 165 ntBASIC1.31□□□□□ -2.2
CSPG5O95196 Y_RNA.336-201ENST00000365307 109 ntBASIC1.3□□□□□ -2.2
CSPG5O95196 RNU6-442P-201ENST00000383968 104 ntBASIC1.3□□□□□ -2.2
CSPG5O95196 AL606845.1-201ENST00000404881 255 ntBASIC1.3□□□□□ -2.2
CSPG5O95196 SNRPGP14-201ENST00000435400 219 ntBASIC1.3□□□□□ -2.2
CSPG5O95196 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
CSPG5O95196 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.3□□□□□ -2.2
CSPG5O95196 SNORD77.4-201ENST00000516158 81 ntBASIC1.3□□□□□ -2.2
CSPG5O95196 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
CSPG5O95196 Pinc.1-201ENST00000616452 154 ntBASIC1.3□□□□□ -2.2
CSPG5O95196 MIR6788-201ENST00000618842 66 ntBASIC1.3□□□□□ -2.2
CSPG5O95196 MIR411-201ENST00000362239 96 ntBASIC1.29□□□□□ -2.2
CSPG5O95196 Y_RNA.83-201ENST00000363005 113 ntBASIC1.29□□□□□ -2.2
CSPG5O95196 RNU6-268P-201ENST00000364174 107 ntBASIC1.29□□□□□ -2.2
CSPG5O95196 Y_RNA.274-201ENST00000364714 101 ntBASIC1.29□□□□□ -2.2
CSPG5O95196 Y_RNA.486-201ENST00000384398 107 ntBASIC1.29□□□□□ -2.2
CSPG5O95196 Y_RNA.552-201ENST00000384665 112 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms