Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SNORA31.4-201ENST00000516049 129 ntBASIC2.35□□□□□ -2.03
SHISA3A0PJX4 SNORA40.13-201ENST00000516379 120 ntBASIC2.35□□□□□ -2.03
SHISA3A0PJX4 RNU7-53P-201ENST00000516705 60 ntBASIC2.35□□□□□ -2.03
SHISA3A0PJX4 Y_RNA.818-201ENST00000618813 71 ntBASIC2.35□□□□□ -2.03
SHISA3A0PJX4 RNU6-661P-201ENST00000362409 107 ntBASIC2.34□□□□□ -2.03
SHISA3A0PJX4 RNU6-640P-201ENST00000363693 105 ntBASIC2.34□□□□□ -2.03
SHISA3A0PJX4 Y_RNA.299-201ENST00000364973 94 ntBASIC2.34□□□□□ -2.03
SHISA3A0PJX4 SNORA24-201ENST00000384096 131 ntBASIC2.34□□□□□ -2.03
SHISA3A0PJX4 MIR516B2-201ENST00000385190 85 ntBASIC2.34□□□□□ -2.03
SHISA3A0PJX4 RNY4P30-201ENST00000410216 95 ntBASIC2.34□□□□□ -2.03
SHISA3A0PJX4 RNA5SP261-201ENST00000410536 106 ntBASIC2.34□□□□□ -2.03
SHISA3A0PJX4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.34□□□□□ -2.03
SHISA3A0PJX4 AL137847.3-201ENST00000611521 109 ntBASIC2.34□□□□□ -2.03
SHISA3A0PJX4 AC092881.1-201ENST00000638218 2733 ntBASIC2.34□□□□□ -2.03
SHISA3A0PJX4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.04
SHISA3A0PJX4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
SHISA3A0PJX4 Y_RNA.531-201ENST00000384589 121 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 RNU6-1319P-201ENST00000390855 104 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 RNU6-747P-201ENST00000390928 104 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 RNU6-241P-201ENST00000391148 104 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 RNA5SP181-201ENST00000410246 98 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 RNU6-177P-201ENST00000411257 104 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 AC022018.1-201ENST00000430685 241 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 AL135938.1-201ENST00000443141 297 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 PGBD4P5-201ENST00000445958 426 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 RNU2-13P-201ENST00000515909 113 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 RNU7-6P-201ENST00000516845 62 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 RNU6-158P-201ENST00000517104 100 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 AC004812.1-201ENST00000540773 146 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 MIR3152-201ENST00000579801 74 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 MIR4635-201ENST00000583759 79 ntBASIC2.33□□□□□ -2.04
SHISA3A0PJX4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
SHISA3A0PJX4 AL365361.1-201ENST00000566942 3481 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 SNORD115-19-201ENST00000363098 82 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 SNORD115-18-201ENST00000363293 82 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 SNORD115-17-201ENST00000364612 82 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 POLR2J4-204ENST00000418424 324 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 RPL39P25-201ENST00000449384 154 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.32□□□□□ -2.04
SHISA3A0PJX4 RPS29P29-201ENST00000456396 171 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 S100A11P2-201ENST00000467589 312 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 AC099513.1-201ENST00000490423 301 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.32□□□□□ -2.04
SHISA3A0PJX4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SHISA3A0PJX4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHISA3A0PJX4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SHISA3A0PJX4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHISA3A0PJX4 MIR424-201ENST00000362227 98 ntBASIC2.31□□□□□ -2.04
SHISA3A0PJX4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.31□□□□□ -2.04
SHISA3A0PJX4 AC093850.1-201ENST00000454121 251 ntBASIC2.31□□□□□ -2.04
SHISA3A0PJX4 RNU6-970P-201ENST00000516312 107 ntBASIC2.31□□□□□ -2.04
SHISA3A0PJX4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.31□□□□□ -2.04
SHISA3A0PJX4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.31□□□□□ -2.04
SHISA3A0PJX4 SNORD3E-202ENST00000627253 216 ntBASIC2.31□□□□□ -2.04
SHISA3A0PJX4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.31□□□□□ -2.04
SHISA3A0PJX4 MIR2052-201ENST00000636055 55 ntBASIC2.31□□□□□ -2.04
SHISA3A0PJX4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SHISA3A0PJX4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.3□□□□□ -2.04
SHISA3A0PJX4 SNORA51.10-201ENST00000384418 136 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 RNU6-851P-201ENST00000384565 107 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 RNU6-816P-201ENST00000390914 107 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 RNU6-1268P-201ENST00000391214 107 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 RNU6-1239P-201ENST00000391310 107 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 COTL1P1-201ENST00000422309 375 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 AL512326.2-201ENST00000426359 151 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 RNU7-73P-201ENST00000458743 63 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 RNU7-67P-201ENST00000459003 62 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 SNORD123-201ENST00000459473 70 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.3□□□□□ -2.04
SHISA3A0PJX4 RNU6-904P-201ENST00000516206 101 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 MIR4529-201ENST00000578110 78 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.3□□□□□ -2.04
SHISA3A0PJX4 SNORD14A-201ENST00000606526 91 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 AC087741.2-201ENST00000619415 172 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.3□□□□□ -2.04
SHISA3A0PJX4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SHISA3A0PJX4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHISA3A0PJX4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.29□□□□□ -2.04
SHISA3A0PJX4 SNORD115-2-201ENST00000362842 82 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 RNU1-112P-201ENST00000364401 164 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 SNORD115-20-201ENST00000365099 82 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 Y_RNA.430-201ENST00000384081 110 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 Y_RNA.507-201ENST00000384500 99 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 MIR526A1-201ENST00000384897 85 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 MIR590-201ENST00000385008 97 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 RN7SKP192-201ENST00000411291 327 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 AC105272.1-201ENST00000438604 198 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 RNU7-113P-201ENST00000459273 62 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 RNA5SP402-201ENST00000517148 110 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 MIR6841-201ENST00000637129 72 ntBASIC2.29□□□□□ -2.04
SHISA3A0PJX4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SHISA3A0PJX4 Y_RNA.537-201ENST00000384626 109 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 MIR1302-4-201ENST00000408701 150 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 RNU4-69P-201ENST00000410677 143 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 RNA5SP100-201ENST00000410903 110 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 RNA5SP59-201ENST00000410922 110 ntBASIC2.28□□□□□ -2.04
SHISA3A0PJX4 RNA5SP450-201ENST00000411206 102 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 188.7 ms