Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 SNORA11.1-201ENST00000408133 129 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RN7SKP284-201ENST00000411002 343 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC245047.3-201ENST00000429428 127 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RPL23AP83-201ENST00000434984 473 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 Y_RNA.649-201ENST00000459077 103 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC114811.1-201ENST00000507207 168 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-830P-201ENST00000516353 107 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SNORD45.4-201ENST00000516629 73 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNA5SP437-201ENST00000517249 129 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.38□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU1-58P-201ENST00000362413 163 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SNORA16.1-201ENST00000364597 132 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 Y_RNA.528-201ENST00000384575 108 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-440P-201ENST00000390882 105 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNA5SP323-201ENST00000391094 133 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SNORA26-201ENST00000391286 122 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU2-40P-201ENST00000410833 196 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC023449.1-201ENST00000454464 154 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RPL23AP63-201ENST00000498752 471 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-168P-201ENST00000516189 101 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 MIR1273D-201ENST00000577266 86 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 MIR3126-201ENST00000577443 74 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 MIR5094-201ENST00000578766 85 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 MIR4287-201ENST00000579398 78 ntBASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.37□□□□□ -2.19
IGKV3D-20A0A0C4DH25 Y_RNA.116-201ENST00000363292 103 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SNORA63D-201ENST00000364359 132 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SNORD18B-201ENST00000365659 72 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-296P-201ENST00000384608 107 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 U8.16-201ENST00000391279 133 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 HMGN2P3-201ENST00000433603 273 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 HMGN2P5-201ENST00000436882 273 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 STAG3L5P-204ENST00000443759 179 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC099513.1-201ENST00000490423 301 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RPS26P48-201ENST00000491713 339 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU2-35P-201ENST00000516446 142 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNY4P20-201ENST00000516678 93 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 MIR4419B-201ENST00000577260 68 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AL137067.1-201ENST00000615933 120 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AL121890.5-201ENST00000620848 304 ntBASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
IGKV3D-20A0A0C4DH25 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-1255P-201ENST00000363434 112 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-640P-201ENST00000363693 105 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SNORD115-28-201ENST00000363931 81 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 Y_RNA.281-201ENST00000364774 94 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SNORD48-201ENST00000364953 64 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SNORA51.10-201ENST00000384418 136 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-880P-201ENST00000384526 107 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SNORA19.1-201ENST00000410656 129 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 MIR1270-201ENST00000459320 83 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNA5SP137-201ENST00000516833 135 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNA5SP170-201ENST00000517150 101 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC024614.2-201ENST00000577584 372 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 MIR4679-2-201ENST00000578358 77 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC087685.1-201ENST00000587507 141 ntBASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
IGKV3D-20A0A0C4DH25 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 Y_RNA.43-201ENST00000362670 111 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 Y_RNA.85-201ENST00000363014 111 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-1107P-201ENST00000364817 104 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 Y_RNA.344-201ENST00000365381 112 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 Y_RNA.348-201ENST00000365403 103 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-905P-201ENST00000384434 107 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 MIR518A2-201ENST00000384966 87 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU7-123P-201ENST00000515911 60 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-126P-201ENST00000516685 103 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 RNU6-1258P-201ENST00000516911 111 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AP003484.1-201ENST00000530974 250 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SUB1P4-201ENST00000566062 339 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC007012.1-201ENST00000567192 175 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC012493.3-201ENST00000604494 112 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC134878.1-201ENST00000619901 243 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 AC015726.2-201ENST00000620112 122 ntBASIC1.34□□□□□ -2.19
IGKV3D-20A0A0C4DH25 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
IGKV3D-20A0A0C4DH25 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 RNU4-16P-201ENST00000364737 141 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 snoU2-30.1-201ENST00000365012 70 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 Y_RNA.346-201ENST00000365385 112 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 SNORA2.2-201ENST00000365473 135 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 RNU6-1189P-201ENST00000383958 107 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 RNU6-442P-201ENST00000383968 104 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 RNU6-424P-201ENST00000384367 105 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 MIR515-2-201ENST00000384883 83 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 MIR515-1-201ENST00000384884 83 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 MIR526A1-201ENST00000384897 85 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 MIR570-201ENST00000384917 97 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 MIR676-201ENST00000390702 67 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 RNA5SP501-201ENST00000410990 112 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 Z98742.3-201ENST00000418637 326 ntBASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
IGKV3D-20A0A0C4DH25 AC093850.1-201ENST00000454121 251 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms