Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SNORD115-16-201ENST00000363887 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-6-201ENST00000363942 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-42-201ENST00000364273 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-740P-201ENST00000364734 105 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-15-201ENST00000364809 81 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-1-201ENST00000364961 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-26-201ENST00000365067 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-10-201ENST00000365073 81 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-43-201ENST00000365503 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-36-201ENST00000365629 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 MIR593-201ENST00000384856 100 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD12C-201ENST00000386307 89 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORA26-201ENST00000391286 122 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 MIR548O-201ENST00000408583 114 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORA36B-201ENST00000410438 131 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 RNU2-14P-201ENST00000411053 191 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SUMO1P3-201ENST00000439961 304 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 PRDX4P1-201ENST00000507189 574 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 RNU7-129P-201ENST00000516128 62 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 AC005357.1-201ENST00000588399 301 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-40-201ENST00000606510 82 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 MIR6828-201ENST00000636181 60 ntBASIC-0.19□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 RNA5SP325-201ENST00000363756 130 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-756P-201ENST00000383997 107 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 MIR610-201ENST00000385139 96 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 RNU4-14P-201ENST00000410858 122 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-938P-201ENST00000411285 103 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 MTND3P8-201ENST00000412909 339 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 MTATP6P17-201ENST00000431030 672 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 RNU7-141P-201ENST00000459304 62 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 AC107297.1-201ENST00000459991 176 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-307P-201ENST00000516743 106 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 AC141557.1-201ENST00000540982 400 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 MIR2681-201ENST00000581814 105 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 MIR4305-201ENST00000583252 102 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 AL080274.1-201ENST00000605565 220 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 uc_338.22-201ENST00000622722 187 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 AC138305.3-201ENST00000624988 240 ntBASIC-0.2□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 MT-TF-201ENST00000387314 71 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 MIR760-201ENST00000390220 80 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-510P-201ENST00000391239 108 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 RNA5SP496-201ENST00000391240 109 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 AC006600.1-201ENST00000572529 153 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 AC090517.2-201ENST00000614966 680 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 AC022140.2-201ENST00000623500 188 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 AC067863.3-201ENST00000624172 122 ntBASIC-0.21□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-929P-201ENST00000384429 107 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 SNORD115-47-201ENST00000391226 86 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 AC010655.3-201ENST00000478818 450 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-469P-201ENST00000516253 101 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 RNU6-504P-201ENST00000516568 104 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 AC131281.1-201ENST00000522984 164 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 MIR3688-2-201ENST00000636963 87 ntBASIC-0.22□□□□□ -2.44
TRAV41A0A0B4J266 SNORA1.1-201ENST00000364671 133 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 RNA5SP128-201ENST00000365305 116 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 SNORA72.4-201ENST00000384174 132 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 RNU4-83P-201ENST00000410863 133 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 MTCO1P5-201ENST00000433573 344 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 MTND4P17-201ENST00000470444 350 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 SNORA31.14-201ENST00000516728 116 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 RNU7-4P-201ENST00000516961 62 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 RNA5SP47-201ENST00000517230 109 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 AC026407.1-201ENST00000518369 204 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 MIR4752-201ENST00000579672 72 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 RNU1-29P-201ENST00000606574 126 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 U2.1-201ENST00000618978 145 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 MIR499B-201ENST00000636498 73 ntBASIC-0.23□□□□□ -2.45
TRAV41A0A0B4J266 RNU6-801P-201ENST00000364087 105 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 SNORA32.1-201ENST00000364514 115 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 RNU6V-201ENST00000384105 107 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 SNORD93-201ENST00000408813 74 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 RNU7-149P-201ENST00000516739 59 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 AC144568.1-201ENST00000520139 137 ntBASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.24□□□□□ -2.45
TRAV41A0A0B4J266 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.25□□□□□ -2.45
TRAV41A0A0B4J266 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.25□□□□□ -2.45
TRAV41A0A0B4J266 SNORD115-28-201ENST00000363931 81 ntBASIC-0.25□□□□□ -2.45
TRAV41A0A0B4J266 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.25□□□□□ -2.45
TRAV41A0A0B4J266 RNU6-890P-201ENST00000384121 107 ntBASIC-0.25□□□□□ -2.45
TRAV41A0A0B4J266 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms