Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 Y_RNA.238-201ENST00000364441 102 ntBASIC1.11□□□□□ -2.23
Q9N2K0 Y_RNA.288-201ENST00000364854 92 ntBASIC1.11□□□□□ -2.23
Q9N2K0 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
Q9N2K0 SNORD72-201ENST00000390994 80 ntBASIC1.11□□□□□ -2.23
Q9N2K0 MIR548H3-201ENST00000408771 118 ntBASIC1.11□□□□□ -2.23
Q9N2K0 RNU4-62P-201ENST00000410125 130 ntBASIC1.11□□□□□ -2.23
Q9N2K0 Y_RNA.590-201ENST00000410140 107 ntBASIC1.11□□□□□ -2.23
Q9N2K0 BTF3P4-201ENST00000418852 495 ntBASIC1.11□□□□□ -2.23
Q9N2K0 MTND2P23-201ENST00000422990 651 ntBASIC1.11□□□□□ -2.23
Q9N2K0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.11□□□□□ -2.23
Q9N2K0 MTCYBP9-201ENST00000431021 303 ntBASIC1.11□□□□□ -2.23
Q9N2K0 AC048334.1-201ENST00000477975 159 ntBASIC1.11□□□□□ -2.23
Q9N2K0 BX284668.6-201ENST00000606899 438 ntBASIC1.11□□□□□ -2.23
Q9N2K0 snoU13.31-201ENST00000607291 104 ntBASIC1.11□□□□□ -2.23
Q9N2K0 AL391903.3-201ENST00000612158 163 ntBASIC1.11□□□□□ -2.23
Q9N2K0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
Q9N2K0 Y_RNA.117-201ENST00000363294 101 ntBASIC1.1□□□□□ -2.23
Q9N2K0 SNORA1.2-201ENST00000365189 134 ntBASIC1.1□□□□□ -2.23
Q9N2K0 Y_RNA.370-201ENST00000365589 108 ntBASIC1.1□□□□□ -2.23
Q9N2K0 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
Q9N2K0 RNA5SP247-201ENST00000411181 105 ntBASIC1.1□□□□□ -2.23
Q9N2K0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.1□□□□□ -2.23
Q9N2K0 AC245047.8-201ENST00000456455 284 ntBASIC1.1□□□□□ -2.23
Q9N2K0 SNORD77.4-201ENST00000516158 81 ntBASIC1.1□□□□□ -2.23
Q9N2K0 Y_RNA.679-201ENST00000516416 91 ntBASIC1.1□□□□□ -2.23
Q9N2K0 MIR4282-201ENST00000583613 67 ntBASIC1.1□□□□□ -2.23
Q9N2K0 AL049861.1-201ENST00000603130 150 ntBASIC1.1□□□□□ -2.23
Q9N2K0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.1□□□□□ -2.23
Q9N2K0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Q9N2K0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Q9N2K0 Y_RNA.133-201ENST00000363428 110 ntBASIC1.09□□□□□ -2.23
Q9N2K0 Y_RNA.396-201ENST00000383949 103 ntBASIC1.09□□□□□ -2.23
Q9N2K0 RNY3P5-201ENST00000384127 102 ntBASIC1.09□□□□□ -2.23
Q9N2K0 SNORA80D-201ENST00000384488 135 ntBASIC1.09□□□□□ -2.23
Q9N2K0 MIR222-201ENST00000384992 110 ntBASIC1.09□□□□□ -2.23
Q9N2K0 MIR626-201ENST00000385032 94 ntBASIC1.09□□□□□ -2.23
Q9N2K0 RNU6-910P-201ENST00000390844 107 ntBASIC1.09□□□□□ -2.23
Q9N2K0 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
Q9N2K0 RN7SKP164-201ENST00000516138 266 ntBASIC1.09□□□□□ -2.23
Q9N2K0 AC100767.1-201ENST00000528178 123 ntBASIC1.09□□□□□ -2.23
Q9N2K0 MIR4781-201ENST00000585250 76 ntBASIC1.09□□□□□ -2.23
Q9N2K0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.09□□□□□ -2.23
Q9N2K0 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
Q9N2K0 AC068700.1-201ENST00000565862 3754 ntBASIC1.09□□□□□ -2.24
Q9N2K0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
Q9N2K0 SNORA26-201ENST00000391286 122 ntBASIC1.08□□□□□ -2.24
Q9N2K0 RNU2-55P-201ENST00000411146 174 ntBASIC1.08□□□□□ -2.24
Q9N2K0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.08□□□□□ -2.24
Q9N2K0 SNORD116-28-201ENST00000516123 91 ntBASIC1.08□□□□□ -2.24
Q9N2K0 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
Q9N2K0 AC015726.2-201ENST00000620112 122 ntBASIC1.08□□□□□ -2.24
Q9N2K0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
Q9N2K0 ZNF209P-201ENST00000593450 2304 ntBASIC1.07□□□□□ -2.24
Q9N2K0 Y_RNA.24-201ENST00000362508 103 ntBASIC1.07□□□□□ -2.24
Q9N2K0 Y_RNA.122-201ENST00000363331 96 ntBASIC1.07□□□□□ -2.24
Q9N2K0 Y_RNA.304-201ENST00000365011 112 ntBASIC1.07□□□□□ -2.24
Q9N2K0 U8.17-201ENST00000391292 132 ntBASIC1.07□□□□□ -2.24
Q9N2K0 AP1B1P2-201ENST00000416196 106 ntBASIC1.07□□□□□ -2.24
Q9N2K0 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
Q9N2K0 RPS29P29-201ENST00000456396 171 ntBASIC1.07□□□□□ -2.24
Q9N2K0 SNORD127-201ENST00000458892 86 ntBASIC1.07□□□□□ -2.24
Q9N2K0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.07□□□□□ -2.24
Q9N2K0 SNORD79.1-201ENST00000516069 84 ntBASIC1.07□□□□□ -2.24
Q9N2K0 RNU7-40P-201ENST00000516397 64 ntBASIC1.07□□□□□ -2.24
Q9N2K0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.07□□□□□ -2.24
Q9N2K0 MIR3192-201ENST00000584920 77 ntBASIC1.07□□□□□ -2.24
Q9N2K0 PRELID3BP2-201ENST00000605362 201 ntBASIC1.07□□□□□ -2.24
Q9N2K0 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
Q9N2K0 Y_RNA.229-201ENST00000364347 113 ntBASIC1.06□□□□□ -2.24
Q9N2K0 Y_RNA.587-201ENST00000391210 103 ntBASIC1.06□□□□□ -2.24
Q9N2K0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.06□□□□□ -2.24
Q9N2K0 SCARNA8-201ENST00000515924 131 ntBASIC1.06□□□□□ -2.24
Q9N2K0 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
Q9N2K0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.06□□□□□ -2.24
Q9N2K0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.06□□□□□ -2.24
Q9N2K0 MIR548AR-201ENST00000582191 57 ntBASIC1.06□□□□□ -2.24
Q9N2K0 AC012433.1-201ENST00000588916 398 ntBASIC1.06□□□□□ -2.24
Q9N2K0 AL512598.1-201ENST00000610158 273 ntBASIC1.06□□□□□ -2.24
Q9N2K0 AC008133.2-201ENST00000624540 351 ntBASIC1.06□□□□□ -2.24
Q9N2K0 RNA5SP264-201ENST00000363115 107 ntBASIC1.05□□□□□ -2.24
Q9N2K0 RNU4-10P-201ENST00000364383 140 ntBASIC1.05□□□□□ -2.24
Q9N2K0 Y_RNA.562-201ENST00000384695 113 ntBASIC1.05□□□□□ -2.24
Q9N2K0 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
Q9N2K0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.05□□□□□ -2.24
Q9N2K0 RNU6-321P-201ENST00000410912 106 ntBASIC1.05□□□□□ -2.24
Q9N2K0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.05□□□□□ -2.24
Q9N2K0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.05□□□□□ -2.24
Q9N2K0 AC004223.1-201ENST00000479840 271 ntBASIC1.05□□□□□ -2.24
Q9N2K0 RNU7-41P-201ENST00000515917 61 ntBASIC1.05□□□□□ -2.24
Q9N2K0 RNU4-57P-201ENST00000515980 135 ntBASIC1.05□□□□□ -2.24
Q9N2K0 RNU11-2P-201ENST00000516898 142 ntBASIC1.05□□□□□ -2.24
Q9N2K0 RNU6-365P-201ENST00000517113 106 ntBASIC1.05□□□□□ -2.24
Q9N2K0 AL359821.1-201ENST00000605519 182 ntBASIC1.05□□□□□ -2.24
Q9N2K0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
Q9N2K0 MIR103A2-201ENST00000362154 78 ntBASIC1.04□□□□□ -2.24
Q9N2K0 MIR337-201ENST00000362281 93 ntBASIC1.04□□□□□ -2.24
Q9N2K0 Y_RNA.262-201ENST00000364641 102 ntBASIC1.04□□□□□ -2.24
Q9N2K0 SNORD24-201ENST00000383884 75 ntBASIC1.04□□□□□ -2.24
Q9N2K0 Y_RNA.537-201ENST00000384626 109 ntBASIC1.04□□□□□ -2.24
Q9N2K0 MIR616-201ENST00000385293 97 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms