Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 AC091959.1-201ENST00000495857 238 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 SERF1AP1-201ENST00000514575 187 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 DEFB108E-201ENST00000524692 240 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 CYP3A137P-201ENST00000562436 69 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 MIR3973-201ENST00000579824 107 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 AL357312.1-201ENST00000603879 298 ntBASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
ZNF541Q9H0D2 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.47-201ENST00000362697 108 ntBASIC1.29□□□□□ -2.2
ZNF541Q9H0D2 RNU6-662P-201ENST00000384253 104 ntBASIC1.29□□□□□ -2.2
ZNF541Q9H0D2 MIR516B2-201ENST00000385190 85 ntBASIC1.29□□□□□ -2.2
ZNF541Q9H0D2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.29□□□□□ -2.2
ZNF541Q9H0D2 RPL23AP91-201ENST00000569211 455 ntBASIC1.29□□□□□ -2.2
ZNF541Q9H0D2 U6.104-201ENST00000637979 90 ntBASIC1.29□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.14-201ENST00000362415 103 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 RNU6-1209P-201ENST00000363655 107 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.237-201ENST00000364439 102 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 U8.5-201ENST00000364528 136 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 SNORD50B-201ENST00000364995 70 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.396-201ENST00000383949 103 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 MIR136-201ENST00000385207 82 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 MIR1278-201ENST00000408753 81 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 HMGN2P32-201ENST00000444648 269 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 RNU6-917P-201ENST00000516294 104 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 RNU6-1045P-201ENST00000516321 107 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 SNORA27.4-201ENST00000516650 95 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 MIR4762-201ENST00000585261 75 ntBASIC1.28□□□□□ -2.2
ZNF541Q9H0D2 Y_RNA.176-201ENST00000363815 109 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.217-201ENST00000364214 105 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 RNU6-144P-201ENST00000383951 107 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.461-201ENST00000384263 103 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 MIR653-201ENST00000385279 96 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 BTF3P11-201ENST00000426582 477 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.641-201ENST00000459414 105 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 MTCO2P24-201ENST00000515611 426 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 AC005357.1-201ENST00000588399 301 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 SNORD114-21-201ENST00000606412 72 ntBASIC1.27□□□□□ -2.21
ZNF541Q9H0D2 UBE2WP1-201ENST00000362030 340 ntBASIC1.26□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.68-201ENST00000362881 102 ntBASIC1.26□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.251-201ENST00000364551 99 ntBASIC1.26□□□□□ -2.21
ZNF541Q9H0D2 MIR1302-6-201ENST00000408466 90 ntBASIC1.26□□□□□ -2.21
ZNF541Q9H0D2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.26□□□□□ -2.21
ZNF541Q9H0D2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.26□□□□□ -2.21
ZNF541Q9H0D2 AC019288.1-201ENST00000557918 224 ntBASIC1.26□□□□□ -2.21
ZNF541Q9H0D2 AL020996.3-201ENST00000606617 222 ntBASIC1.26□□□□□ -2.21
ZNF541Q9H0D2 RNU6-1272P-201ENST00000362776 107 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.336-201ENST00000365307 109 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 RNU6-442P-201ENST00000383968 104 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 SNORD38C-201ENST00000384381 69 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.518-201ENST00000384552 113 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 MIR193B-201ENST00000384907 83 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 RNU6-651P-201ENST00000411040 105 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 MTCYBP9-201ENST00000431021 303 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 MIR5692C2-201ENST00000577959 77 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 AL008718.3-201ENST00000610217 321 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 AC013791.1-201ENST00000616619 62 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 snoU18.1-201ENST00000629629 71 ntBASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.25□□□□□ -2.21
ZNF541Q9H0D2 MIR335-201ENST00000362173 94 ntBASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 MIR367-201ENST00000362299 68 ntBASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.117-201ENST00000363294 101 ntBASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.149-201ENST00000363558 117 ntBASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 RNU6-674P-201ENST00000363831 107 ntBASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 MIR526A1-201ENST00000384897 85 ntBASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.681-201ENST00000516445 113 ntBASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 SNORA18.7-201ENST00000516910 131 ntBASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 MIR1273G-201ENST00000577677 100 ntBASIC1.24□□□□□ -2.21
ZNF541Q9H0D2 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.242-201ENST00000364473 110 ntBASIC1.23□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.275-201ENST00000364726 110 ntBASIC1.23□□□□□ -2.21
ZNF541Q9H0D2 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
ZNF541Q9H0D2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.23□□□□□ -2.21
ZNF541Q9H0D2 MIR4724-201ENST00000579485 89 ntBASIC1.23□□□□□ -2.21
ZNF541Q9H0D2 AC087685.1-201ENST00000587507 141 ntBASIC1.23□□□□□ -2.21
ZNF541Q9H0D2 AC006006.1-201ENST00000603082 144 ntBASIC1.23□□□□□ -2.21
ZNF541Q9H0D2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
ZNF541Q9H0D2 Y_RNA.44-201ENST00000362676 108 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 RNU4-38P-201ENST00000364472 129 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 RNU6-740P-201ENST00000364734 105 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 RNU6-969P-201ENST00000383900 105 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 RNU6-1289P-201ENST00000384431 106 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 MIR520C-201ENST00000385005 87 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 MIR15B-201ENST00000385045 98 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 RNU6-383P-201ENST00000410864 94 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 NDUFA4P2-201ENST00000489989 244 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 RNU7-40P-201ENST00000516397 64 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.22□□□□□ -2.21
ZNF541Q9H0D2 MIR4643-201ENST00000577473 78 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms