Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNA5SP356-201ENST00000515972 94 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 SUMO2P16-201ENST00000519475 264 ntBASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM56Q9BRZ2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 MIR449A-201ENST00000362113 91 ntBASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 RNU1-112P-201ENST00000364401 164 ntBASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 RNA5SP126-201ENST00000365092 109 ntBASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 MIR5094-201ENST00000578766 85 ntBASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 MIR3683-201ENST00000580847 82 ntBASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 MIR4658-201ENST00000584344 65 ntBASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 ELOCP29-201ENST00000588193 334 ntBASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 AC091932.4-201ENST00000623386 200 ntBASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TRIM56Q9BRZ2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 RNU6-424P-201ENST00000384367 105 ntBASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 SNORA48.1-201ENST00000390879 135 ntBASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 AL135938.1-201ENST00000443141 297 ntBASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 MIR3605-201ENST00000583214 100 ntBASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 AL596211.1-201ENST00000569873 2277 ntBASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM56Q9BRZ2 ICE2P2-201ENST00000483823 2787 ntBASIC2.75□□□□□ -1.97
TRIM56Q9BRZ2 MIR26A1-201ENST00000362205 77 ntBASIC2.75□□□□□ -1.97
TRIM56Q9BRZ2 RNU1-51P-201ENST00000365345 176 ntBASIC2.75□□□□□ -1.97
TRIM56Q9BRZ2 Y_RNA.544-201ENST00000384650 113 ntBASIC2.75□□□□□ -1.97
TRIM56Q9BRZ2 AL035398.1-201ENST00000430869 322 ntBASIC2.75□□□□□ -1.97
TRIM56Q9BRZ2 MIR3163-201ENST00000581592 73 ntBASIC2.75□□□□□ -1.97
TRIM56Q9BRZ2 MIR4305-201ENST00000583252 102 ntBASIC2.75□□□□□ -1.97
TRIM56Q9BRZ2 U1.36-201ENST00000620684 176 ntBASIC2.75□□□□□ -1.97
TRIM56Q9BRZ2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
TRIM56Q9BRZ2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 Y_RNA.348-201ENST00000365403 103 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 MIR597-201ENST00000384968 97 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 AL034345.1-201ENST00000407768 123 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 RNA5SP270-201ENST00000411361 118 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 HMGN2P3-201ENST00000433603 273 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 HMGN2P5-201ENST00000436882 273 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 RNU7-123P-201ENST00000515911 60 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 RNU6-830P-201ENST00000516353 107 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 RNA5SP367-201ENST00000516557 118 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 GTF3AP2-201ENST00000557014 266 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 MIR3670-2-201ENST00000582974 65 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 MIR3670-1-201ENST00000584160 65 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 MIR3670-3-201ENST00000584855 65 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 AC078899.2-201ENST00000595282 212 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 MIR3670-4-201ENST00000612260 65 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 AP001318.4-201ENST00000616637 121 ntBASIC2.74□□□□□ -1.97
TRIM56Q9BRZ2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 Y_RNA.241-201ENST00000364470 117 ntBASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 SNORA27-201ENST00000384323 126 ntBASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 RNU6-905P-201ENST00000384434 107 ntBASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 MIR520A-201ENST00000384862 85 ntBASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 MIR548D2-201ENST00000384955 97 ntBASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 AC105272.1-201ENST00000438604 198 ntBASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 SNORA40.13-201ENST00000516379 120 ntBASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 MIR5009-201ENST00000578736 100 ntBASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM56Q9BRZ2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 MIRLET7C-201ENST00000362160 84 ntBASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 SNORA25.6-201ENST00000364121 118 ntBASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 U8.6-201ENST00000364939 135 ntBASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 AL138827.1-201ENST00000402666 306 ntBASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 SNX2P2-201ENST00000424553 323 ntBASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 RNU7-96P-201ENST00000459535 64 ntBASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 AC068339.1-201ENST00000526965 141 ntBASIC2.72□□□□□ -1.97
TRIM56Q9BRZ2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 MIR302B-201ENST00000362188 73 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-34-201ENST00000362441 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-12-201ENST00000362583 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-29-201ENST00000362834 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-9-201ENST00000362912 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-21-201ENST00000362963 81 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-14-201ENST00000363090 81 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-13-201ENST00000363358 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-41-201ENST00000363608 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-11-201ENST00000363616 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-5-201ENST00000363633 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-39-201ENST00000363694 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-4-201ENST00000363810 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-16-201ENST00000363887 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-6-201ENST00000363942 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-42-201ENST00000364273 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-15-201ENST00000364809 81 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-1-201ENST00000364961 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-26-201ENST00000365067 82 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-10-201ENST00000365073 81 ntBASIC2.71□□□□□ -1.98
TRIM56Q9BRZ2 SNORD115-43-201ENST00000365503 82 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms