Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RNU6-388P-201ENST00000517012 105 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 RNU6-389P-201ENST00000517048 105 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 RPL23AP91-201ENST00000569211 455 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 MIR4724-201ENST00000579485 89 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.802-201ENST00000614892 130 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 AL513423.1-201ENST00000621695 132 ntBASIC1.44□□□□□ -2.18
RTP3Q9BQQ7 MIR302D-201ENST00000362275 68 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 MIR367-201ENST00000362299 68 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 SNORD33-201ENST00000362761 85 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.304-201ENST00000365011 112 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 SNORA8.3-201ENST00000384679 139 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 RN7SKP51-201ENST00000410781 304 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 RNU4-71P-201ENST00000516258 113 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 RNY3P16-201ENST00000516338 101 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 AC015688.6-201ENST00000577737 104 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 MIR2681-201ENST00000581814 105 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 JPX_2.1-201ENST00000614161 69 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 AC078938.1-201ENST00000620993 318 ntBASIC1.43□□□□□ -2.18
RTP3Q9BQQ7 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.262-201ENST00000364641 102 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 RNU6-969P-201ENST00000383900 105 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR626-201ENST00000385032 94 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR522-201ENST00000385071 87 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR660-201ENST00000385235 97 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR526A2-201ENST00000390198 65 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 SUMO2P16-201ENST00000519475 264 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 AC100767.1-201ENST00000528178 123 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 MIR4762-201ENST00000585261 75 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 FAM106DP-201ENST00000586416 501 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 SNORD3E-202ENST00000627253 216 ntBASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RTP3Q9BQQ7 RNU6-653P-201ENST00000363074 106 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 SNORD1A-201ENST00000364968 72 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 RNU6-131P-201ENST00000391144 107 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 Y_RNA.626-201ENST00000411288 95 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 RPL30P13-201ENST00000418873 348 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 HSPE1P24-201ENST00000450782 238 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 AC092991.1-201ENST00000477176 376 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 MIR151B-201ENST00000584249 96 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 MIR6788-201ENST00000618842 66 ntBASIC1.41□□□□□ -2.18
RTP3Q9BQQ7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 U8.5-201ENST00000364528 136 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.308-201ENST00000365043 101 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR520E-201ENST00000384867 87 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR513A1-201ENST00000385138 129 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 RNU7-12P-201ENST00000516030 62 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.714-201ENST00000517065 90 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR4778-201ENST00000577635 80 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR5688-201ENST00000580619 83 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 AC141273.2-201ENST00000618989 130 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 MIR8063-201ENST00000621930 81 ntBASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RTP3Q9BQQ7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.199-201ENST00000364014 102 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 snoU2_19.4-201ENST00000364329 80 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 SNORD50B-201ENST00000364995 70 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 RNU6-163P-201ENST00000384396 106 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.552-201ENST00000384665 112 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 SNORA40.6-201ENST00000391153 128 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 RNA5SP496-201ENST00000391240 109 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 MIR1298-201ENST00000408783 112 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 PIGPP3-201ENST00000425307 415 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC093850.1-201ENST00000454121 251 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 SNORD11-201ENST00000459124 84 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 RPS29P1-201ENST00000465274 159 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 COX6CP14-201ENST00000469580 174 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC114811.1-201ENST00000507207 168 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AL049861.1-201ENST00000603130 150 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC120024.3-201ENST00000603167 156 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 AC009779.6-201ENST00000603972 165 ntBASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RTP3Q9BQQ7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.200-201ENST00000364018 102 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.229-201ENST00000364347 113 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 RNU6-923P-201ENST00000364753 107 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 RNA5SP259-201ENST00000365541 109 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 Y_RNA.515-201ENST00000384535 112 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 RNU6-493P-201ENST00000391321 108 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 CYCTP-201ENST00000504253 315 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 SNORD45.4-201ENST00000516629 73 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AC130289.1-201ENST00000577321 73 ntBASIC1.38□□□□□ -2.19
RTP3Q9BQQ7 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms