Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 Y_RNA.666-201ENST00000516187 112 ntBASIC1.92□□□□□ -2.1
KHDC1Q4VXA5 SNORA77B-201ENST00000578179 125 ntBASIC1.92□□□□□ -2.1
KHDC1Q4VXA5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KHDC1Q4VXA5 AL359851.1-201ENST00000569460 4997 ntBASIC1.92□□□□□ -2.1
KHDC1Q4VXA5 RNU6-888P-201ENST00000363010 101 ntBASIC1.91□□□□□ -2.1
KHDC1Q4VXA5 RNU6-978P-201ENST00000364371 103 ntBASIC1.91□□□□□ -2.1
KHDC1Q4VXA5 SNORD61-201ENST00000384252 73 ntBASIC1.91□□□□□ -2.1
KHDC1Q4VXA5 RNU6-804P-201ENST00000384286 107 ntBASIC1.91□□□□□ -2.1
KHDC1Q4VXA5 SNORD38C-201ENST00000384381 69 ntBASIC1.91□□□□□ -2.1
KHDC1Q4VXA5 MIR452-201ENST00000385020 85 ntBASIC1.91□□□□□ -2.1
KHDC1Q4VXA5 AC015922.2-201ENST00000435593 184 ntBASIC1.91□□□□□ -2.1
KHDC1Q4VXA5 snoU13.26-201ENST00000459452 105 ntBASIC1.91□□□□□ -2.1
KHDC1Q4VXA5 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
KHDC1Q4VXA5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.9□□□□□ -2.1
KHDC1Q4VXA5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KHDC1Q4VXA5 ZNF355P-201ENST00000427301 3216 ntBASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 RNU6-597P-201ENST00000365620 102 ntBASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 RNU6-449P-201ENST00000383914 107 ntBASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 Y_RNA.521-201ENST00000384560 114 ntBASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 RNU6-693P-201ENST00000516134 107 ntBASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 SNORA44.1-201ENST00000517031 108 ntBASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 MIR4778-201ENST00000577635 80 ntBASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 DNAJC19P2-201ENST00000593340 302 ntBASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 AC021753.1-201ENST00000635724 168 ntBASIC1.9□□□□□ -2.11
KHDC1Q4VXA5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KHDC1Q4VXA5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
KHDC1Q4VXA5 AL442644.1-201ENST00000454390 3105 ntBASIC1.89□□□□□ -2.11
KHDC1Q4VXA5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KHDC1Q4VXA5 RNU6-199P-201ENST00000362954 107 ntBASIC1.89□□□□□ -2.11
KHDC1Q4VXA5 RNU6-830P-201ENST00000516353 107 ntBASIC1.89□□□□□ -2.11
KHDC1Q4VXA5 RNU6-255P-201ENST00000516957 105 ntBASIC1.89□□□□□ -2.11
KHDC1Q4VXA5 SUMO2P16-201ENST00000519475 264 ntBASIC1.89□□□□□ -2.11
KHDC1Q4VXA5 MIR3646-201ENST00000578301 84 ntBASIC1.89□□□□□ -2.11
KHDC1Q4VXA5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.88□□□□□ -2.11
KHDC1Q4VXA5 Y_RNA.8-201ENST00000362353 102 ntBASIC1.88□□□□□ -2.11
KHDC1Q4VXA5 Y_RNA.393-201ENST00000383936 102 ntBASIC1.88□□□□□ -2.11
KHDC1Q4VXA5 Y_RNA.398-201ENST00000383952 99 ntBASIC1.88□□□□□ -2.11
KHDC1Q4VXA5 U8.13-201ENST00000390842 128 ntBASIC1.88□□□□□ -2.11
KHDC1Q4VXA5 RPL23AP42-201ENST00000471152 471 ntBASIC1.88□□□□□ -2.11
KHDC1Q4VXA5 AC090142.3-201ENST00000519012 385 ntBASIC1.88□□□□□ -2.11
KHDC1Q4VXA5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.88□□□□□ -2.11
KHDC1Q4VXA5 MTND1P7-201ENST00000632801 297 ntBASIC1.88□□□□□ -2.11
KHDC1Q4VXA5 Y_RNA.170-201ENST00000363746 110 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 SNORA25.7-201ENST00000364375 127 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 RNU6-1130P-201ENST00000365434 107 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 RNU6-768P-201ENST00000384683 107 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 MIR548A2-201ENST00000384956 97 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 MIR30A-201ENST00000385092 71 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 MIR136-201ENST00000385207 82 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 MIR548O-201ENST00000408583 114 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 DEFB122-202ENST00000569013 197 ntBASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KHDC1Q4VXA5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 SNORD116-18-201ENST00000383961 92 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 Y_RNA.542-201ENST00000384641 111 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 Y_RNA.547-201ENST00000384654 119 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 MIR518F-201ENST00000384973 87 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 MIR513A1-201ENST00000385138 129 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 RNU7-25P-201ENST00000516544 62 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 RNU6-1270P-201ENST00000517128 108 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 AC007751.1-201ENST00000529260 376 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 AC015688.6-201ENST00000577737 104 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 AL365205.2-201ENST00000594586 68 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 Y_RNA.778-201ENST00000620203 90 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 MIR6844-201ENST00000637122 62 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 ICE2P2-201ENST00000483823 2787 ntBASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
KHDC1Q4VXA5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 SNORA2.2-201ENST00000365473 135 ntBASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 MIR526A1-201ENST00000384897 85 ntBASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 HMGN2P23-201ENST00000456759 269 ntBASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 RNU7-200P-201ENST00000516105 62 ntBASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 MTND5P41-201ENST00000517498 206 ntBASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 MIR6845-201ENST00000613182 61 ntBASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 AC134878.1-201ENST00000619901 243 ntBASIC1.85□□□□□ -2.11
KHDC1Q4VXA5 SNORD115-28-201ENST00000363931 81 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 RNU6-151P-201ENST00000364158 107 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 SNORD48-201ENST00000364953 64 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 RNA5SP259-201ENST00000365541 109 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 RNU6-1292P-201ENST00000383856 107 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 RNY1P5-201ENST00000383890 115 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 SNORA1-201ENST00000384107 130 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 MIR9-3-201ENST00000385084 90 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 MIR653-201ENST00000385279 96 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 SNORA40.18-201ENST00000391200 128 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 snoU13.9-201ENST00000458927 103 ntBASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
KHDC1Q4VXA5 AC015726.2-201ENST00000620112 122 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms