Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 U7.6-201ENST00000610841 64 ntBASIC-0.97□□□□□ -2.56
TPM4P67936 MIR8064-201ENST00000612863 90 ntBASIC-0.97□□□□□ -2.56
TPM4P67936 MIR548AZ-201ENST00000616567 95 ntBASIC-0.97□□□□□ -2.56
TPM4P67936 SNORD114-28-201ENST00000363610 72 ntBASIC-0.98□□□□□ -2.57
TPM4P67936 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.98□□□□□ -2.57
TPM4P67936 RNU7-53P-201ENST00000516705 60 ntBASIC-0.98□□□□□ -2.57
TPM4P67936 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.98□□□□□ -2.57
TPM4P67936 MIR5706-201ENST00000579841 80 ntBASIC-0.98□□□□□ -2.57
TPM4P67936 MIR2681-201ENST00000581814 105 ntBASIC-0.98□□□□□ -2.57
TPM4P67936 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.99□□□□□ -2.57
TPM4P67936 RNU6-291P-201ENST00000384720 107 ntBASIC-0.99□□□□□ -2.57
TPM4P67936 SNORA32.3-201ENST00000384772 121 ntBASIC-0.99□□□□□ -2.57
TPM4P67936 RNU6-710P-201ENST00000410424 105 ntBASIC-0.99□□□□□ -2.57
TPM4P67936 SNORD5.1-201ENST00000458800 75 ntBASIC-0.99□□□□□ -2.57
TPM4P67936 AC127455.1-201ENST00000565496 145 ntBASIC-0.99□□□□□ -2.57
TPM4P67936 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.99□□□□□ -2.57
TPM4P67936 MIR148A-201ENST00000362215 68 ntBASIC-1□□□□□ -2.57
TPM4P67936 RNU6-1085P-201ENST00000363576 107 ntBASIC-1□□□□□ -2.57
TPM4P67936 SNORD114-11-201ENST00000363738 75 ntBASIC-1□□□□□ -2.57
TPM4P67936 Y_RNA.450-201ENST00000384198 113 ntBASIC-1□□□□□ -2.57
TPM4P67936 Y_RNA.536-201ENST00000384621 113 ntBASIC-1□□□□□ -2.57
TPM4P67936 SEPT14P3-201ENST00000439401 183 ntBASIC-1□□□□□ -2.57
TPM4P67936 AL732372.2-207ENST00000445840 183 ntBASIC-1□□□□□ -2.57
TPM4P67936 SEPT14P2-201ENST00000453405 183 ntBASIC-1□□□□□ -2.57
TPM4P67936 SEPT14P4-201ENST00000513445 186 ntBASIC-1□□□□□ -2.57
TPM4P67936 RNU6-155P-201ENST00000516347 100 ntBASIC-1□□□□□ -2.57
TPM4P67936 FO082796.1-201ENST00000523795 183 ntBASIC-1□□□□□ -2.57
TPM4P67936 AC005014.3-201ENST00000605985 190 ntBASIC-1□□□□□ -2.57
TPM4P67936 RNU6-403P-201ENST00000363163 104 ntBASIC-1.01□□□□□ -2.57
TPM4P67936 Y_RNA.118-201ENST00000363300 101 ntBASIC-1.01□□□□□ -2.57
TPM4P67936 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.01□□□□□ -2.57
TPM4P67936 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.01□□□□□ -2.57
TPM4P67936 SNORA75.1-201ENST00000391130 148 ntBASIC-1.01□□□□□ -2.57
TPM4P67936 MTCO3P40-201ENST00000392516 676 ntBASIC-1.01□□□□□ -2.57
TPM4P67936 RNU1-54P-201ENST00000517181 120 ntBASIC-1.01□□□□□ -2.57
TPM4P67936 AC022960.3-201ENST00000619794 441 ntBASIC-1.01□□□□□ -2.57
TPM4P67936 AL162726.3-218ENST00000636401 95 ntBASIC-1.01□□□□□ -2.57
TPM4P67936 MIR655-201ENST00000362159 97 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.02□□□□□ -2.57
TPM4P67936 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.02□□□□□ -2.57
TPM4P67936 RPL39P25-201ENST00000449384 154 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 MTND3P7-201ENST00000474435 343 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 RNU6-966P-201ENST00000516479 104 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 MIR2355-201ENST00000517199 87 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 AC138749.4-201ENST00000563970 127 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 MIR4677-201ENST00000584153 80 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 AC018462.2-201ENST00000605375 395 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 DISC2.1-201ENST00000612827 205 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 AL050303.3-201ENST00000613704 284 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 AC010205.1-201ENST00000616668 449 ntBASIC-1.02□□□□□ -2.57
TPM4P67936 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.03□□□□□ -2.57
TPM4P67936 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.03□□□□□ -2.57
TPM4P67936 MIR548O-201ENST00000408583 114 ntBASIC-1.03□□□□□ -2.57
TPM4P67936 RPL21P38-201ENST00000418090 167 ntBASIC-1.03□□□□□ -2.57
TPM4P67936 RNU6-475P-201ENST00000516073 104 ntBASIC-1.03□□□□□ -2.57
TPM4P67936 RNU7-115P-201ENST00000516433 55 ntBASIC-1.03□□□□□ -2.57
TPM4P67936 MIR4263-201ENST00000584745 83 ntBASIC-1.03□□□□□ -2.57
TPM4P67936 SNORA70.25-201ENST00000612741 95 ntBASIC-1.03□□□□□ -2.57
TPM4P67936 Y_RNA.280-201ENST00000364765 112 ntBASIC-1.04□□□□□ -2.58
TPM4P67936 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.04□□□□□ -2.58
TPM4P67936 RNU6-535P-201ENST00000384722 107 ntBASIC-1.04□□□□□ -2.58
TPM4P67936 AC109327.2-201ENST00000448339 378 ntBASIC-1.04□□□□□ -2.58
TPM4P67936 AC114755.3-201ENST00000481111 251 ntBASIC-1.04□□□□□ -2.58
TPM4P67936 MIR378D2-201ENST00000580636 98 ntBASIC-1.04□□□□□ -2.58
TPM4P67936 MIR3942-201ENST00000585264 109 ntBASIC-1.04□□□□□ -2.58
TPM4P67936 Y_RNA.540-201ENST00000384638 111 ntBASIC-1.05□□□□□ -2.58
TPM4P67936 MIR489-201ENST00000384923 84 ntBASIC-1.05□□□□□ -2.58
TPM4P67936 SNORA40.5-201ENST00000391061 128 ntBASIC-1.05□□□□□ -2.58
TPM4P67936 MTND2P22-201ENST00000444325 1033 ntBASIC-1.05□□□□□ -2.58
TPM4P67936 SNORD11-201ENST00000459124 84 ntBASIC-1.05□□□□□ -2.58
TPM4P67936 RNU6-437P-201ENST00000459408 95 ntBASIC-1.05□□□□□ -2.58
TPM4P67936 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.05□□□□□ -2.58
TPM4P67936 RNU6-923P-201ENST00000364753 107 ntBASIC-1.06□□□□□ -2.58
TPM4P67936 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.06□□□□□ -2.58
TPM4P67936 RNU6-811P-201ENST00000384069 107 ntBASIC-1.06□□□□□ -2.58
TPM4P67936 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.06□□□□□ -2.58
TPM4P67936 MIR4432-201ENST00000581823 84 ntBASIC-1.06□□□□□ -2.58
TPM4P67936 AL590491.3-201ENST00000610731 82 ntBASIC-1.06□□□□□ -2.58
TPM4P67936 MIR548AY-201ENST00000617669 107 ntBASIC-1.06□□□□□ -2.58
TPM4P67936 AL162376.1-201ENST00000624117 175 ntBASIC-1.06□□□□□ -2.58
TPM4P67936 Y_RNA.205-201ENST00000364128 113 ntBASIC-1.07□□□□□ -2.58
TPM4P67936 RNU6-480P-201ENST00000384332 107 ntBASIC-1.07□□□□□ -2.58
TPM4P67936 MIR1278-201ENST00000408753 81 ntBASIC-1.07□□□□□ -2.58
TPM4P67936 AC244250.2-201ENST00000418731 148 ntBASIC-1.07□□□□□ -2.58
TPM4P67936 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-1.07□□□□□ -2.58
TPM4P67936 RPS29P8-201ENST00000445109 171 ntBASIC-1.07□□□□□ -2.58
TPM4P67936 MTND5P34-201ENST00000568888 325 ntBASIC-1.07□□□□□ -2.58
TPM4P67936 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.07□□□□□ -2.58
TPM4P67936 AL391099.1-201ENST00000624635 187 ntBASIC-1.07□□□□□ -2.58
TPM4P67936 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.08□□□□□ -2.58
TPM4P67936 RNA5SP457-201ENST00000363657 124 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 RNU6-708P-201ENST00000384217 107 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 U8.15-201ENST00000390947 134 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 MTATP6P26-201ENST00000445926 662 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 RNU2-11P-201ENST00000459191 187 ntBASIC-1.08□□□□□ -2.58
TPM4P67936 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 446.4 ms