Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
RTP1P59025 AC006441.5-201ENST00000612680 209 ntBASIC2.61□□□□□ -1.99
RTP1P59025 AL137067.1-201ENST00000615933 120 ntBASIC2.61□□□□□ -1.99
RTP1P59025 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTP1P59025 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RTP1P59025 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RTP1P59025 U8.5-201ENST00000364528 136 ntBASIC2.6□□□□□ -1.99
RTP1P59025 MIR802-201ENST00000390235 94 ntBASIC2.6□□□□□ -1.99
RTP1P59025 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
RTP1P59025 SNORA31.11-201ENST00000516528 139 ntBASIC2.6□□□□□ -1.99
RTP1P59025 MIR3169-201ENST00000578032 83 ntBASIC2.6□□□□□ -1.99
RTP1P59025 uc_338.28-201ENST00000612082 187 ntBASIC2.6□□□□□ -1.99
RTP1P59025 U4atac.1-201ENST00000618345 95 ntBASIC2.6□□□□□ -1.99
RTP1P59025 AC134878.1-201ENST00000619901 243 ntBASIC2.6□□□□□ -1.99
RTP1P59025 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RTP1P59025 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RTP1P59025 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RTP1P59025 MIR21-201ENST00000362134 72 ntBASIC2.59□□□□□ -1.99
RTP1P59025 MIR450A1-201ENST00000362262 91 ntBASIC2.59□□□□□ -1.99
RTP1P59025 Y_RNA.116-201ENST00000363292 103 ntBASIC2.59□□□□□ -1.99
RTP1P59025 Y_RNA.140-201ENST00000363474 103 ntBASIC2.59□□□□□ -1.99
RTP1P59025 RNU6-442P-201ENST00000383968 104 ntBASIC2.59□□□□□ -1.99
RTP1P59025 SNORA64-201ENST00000384674 134 ntBASIC2.59□□□□□ -1.99
RTP1P59025 SNRPGP14-201ENST00000435400 219 ntBASIC2.59□□□□□ -1.99
RTP1P59025 AL606517.2-201ENST00000442855 241 ntBASIC2.59□□□□□ -1.99
RTP1P59025 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.59□□□□□ -1.99
RTP1P59025 RNU7-25P-201ENST00000516544 62 ntBASIC2.59□□□□□ -1.99
RTP1P59025 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.59□□□□□ -1.99
RTP1P59025 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
RTP1P59025 RNU6-1084P-201ENST00000362498 107 ntBASIC2.58□□□□□ -2
RTP1P59025 SNORD14E-201ENST00000364009 85 ntBASIC2.58□□□□□ -2
RTP1P59025 RNU6-268P-201ENST00000364174 107 ntBASIC2.58□□□□□ -2
RTP1P59025 Y_RNA.281-201ENST00000364774 94 ntBASIC2.58□□□□□ -2
RTP1P59025 Y_RNA.410-201ENST00000383992 113 ntBASIC2.58□□□□□ -2
RTP1P59025 RNU1-138P-201ENST00000384093 164 ntBASIC2.58□□□□□ -2
RTP1P59025 MIR570-201ENST00000384917 97 ntBASIC2.58□□□□□ -2
RTP1P59025 AL031737.1-201ENST00000450125 223 ntBASIC2.58□□□□□ -2
RTP1P59025 RPS26P48-201ENST00000491713 339 ntBASIC2.58□□□□□ -2
RTP1P59025 AC007012.1-201ENST00000567192 175 ntBASIC2.58□□□□□ -2
RTP1P59025 AC022513.1-201ENST00000624512 117 ntBASIC2.58□□□□□ -2
RTP1P59025 AC092881.1-201ENST00000638218 2733 ntBASIC2.58□□□□□ -2
RTP1P59025 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
RTP1P59025 RNU6-23P-201ENST00000363283 107 ntBASIC2.57□□□□□ -2
RTP1P59025 snoU2-30.1-201ENST00000365012 70 ntBASIC2.57□□□□□ -2
RTP1P59025 RNU6-1189P-201ENST00000383958 107 ntBASIC2.57□□□□□ -2
RTP1P59025 RNU6-106P-201ENST00000384405 107 ntBASIC2.57□□□□□ -2
RTP1P59025 Y_RNA.495-201ENST00000384435 112 ntBASIC2.57□□□□□ -2
RTP1P59025 Y_RNA.547-201ENST00000384654 119 ntBASIC2.57□□□□□ -2
RTP1P59025 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.57□□□□□ -2
RTP1P59025 RNU6-240P-201ENST00000516098 97 ntBASIC2.57□□□□□ -2
RTP1P59025 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.57□□□□□ -2
RTP1P59025 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.57□□□□□ -2
RTP1P59025 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.57□□□□□ -2
RTP1P59025 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RTP1P59025 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.56□□□□□ -2
RTP1P59025 SNORD115-28-201ENST00000363931 81 ntBASIC2.56□□□□□ -2
RTP1P59025 SNORA2.2-201ENST00000365473 135 ntBASIC2.56□□□□□ -2
RTP1P59025 Y_RNA.549-201ENST00000384657 102 ntBASIC2.56□□□□□ -2
RTP1P59025 AC245047.3-201ENST00000429428 127 ntBASIC2.56□□□□□ -2
RTP1P59025 COX6CP6-201ENST00000490840 228 ntBASIC2.56□□□□□ -2
RTP1P59025 RNU6-412P-201ENST00000516434 106 ntBASIC2.56□□□□□ -2
RTP1P59025 SNORD45.4-201ENST00000516629 73 ntBASIC2.56□□□□□ -2
RTP1P59025 AP000942.3-201ENST00000603702 160 ntBASIC2.56□□□□□ -2
RTP1P59025 MIR7111-201ENST00000619751 72 ntBASIC2.56□□□□□ -2
RTP1P59025 MIR4679-1-201ENST00000637619 75 ntBASIC2.56□□□□□ -2
RTP1P59025 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.56□□□□□ -2
RTP1P59025 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RTP1P59025 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
RTP1P59025 Y_RNA.37-201ENST00000362606 108 ntBASIC2.55□□□□□ -2
RTP1P59025 RNU6-1107P-201ENST00000364817 104 ntBASIC2.55□□□□□ -2
RTP1P59025 RNU6-32P-201ENST00000383948 107 ntBASIC2.55□□□□□ -2
RTP1P59025 RNU6-13P-201ENST00000384248 107 ntBASIC2.55□□□□□ -2
RTP1P59025 SNORA67.3-201ENST00000384366 140 ntBASIC2.55□□□□□ -2
RTP1P59025 RNU6-12P-201ENST00000384604 107 ntBASIC2.55□□□□□ -2
RTP1P59025 RNU6-41P-201ENST00000384741 107 ntBASIC2.55□□□□□ -2
RTP1P59025 RNA5SP109-201ENST00000391010 116 ntBASIC2.55□□□□□ -2
RTP1P59025 RNA5SP482-201ENST00000391269 118 ntBASIC2.55□□□□□ -2
RTP1P59025 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RTP1P59025 RNU6-554P-201ENST00000410466 106 ntBASIC2.55□□□□□ -2
RTP1P59025 RNU6-938P-201ENST00000411285 103 ntBASIC2.55□□□□□ -2
RTP1P59025 SNORD36C-201ENST00000516733 66 ntBASIC2.55□□□□□ -2
RTP1P59025 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.55□□□□□ -2
RTP1P59025 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
RTP1P59025 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.55□□□□□ -2
RTP1P59025 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
RTP1P59025 AC245060.5-201ENST00000610778 3293 ntBASIC2.55□□□□□ -2
RTP1P59025 Y_RNA.85-201ENST00000363014 111 ntBASIC2.54□□□□□ -2
RTP1P59025 SNORD115-3-201ENST00000363100 82 ntBASIC2.54□□□□□ -2
RTP1P59025 Y_RNA.265-201ENST00000364677 108 ntBASIC2.54□□□□□ -2
RTP1P59025 SNORA80E-201ENST00000384744 137 ntBASIC2.54□□□□□ -2
RTP1P59025 SNORD12C-201ENST00000386307 89 ntBASIC2.54□□□□□ -2
RTP1P59025 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.54□□□□□ -2
RTP1P59025 AL445646.1-201ENST00000431784 216 ntBASIC2.54□□□□□ -2
RTP1P59025 RNU6-295P-201ENST00000516901 104 ntBASIC2.54□□□□□ -2
RTP1P59025 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.54□□□□□ -2
RTP1P59025 AC022202.1-201ENST00000613515 211 ntBASIC2.54□□□□□ -2
RTP1P59025 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
RTP1P59025 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.54□□□□□ -2
RTP1P59025 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTP1P59025 ZNF720P1-201ENST00000562403 1939 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 234.8 ms