Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AL357312.1-201ENST00000603879 298 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 AL391903.3-201ENST00000612158 163 ntBASIC1.35□□□□□ -2.19
APOBEC1P41238 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
APOBEC1P41238 RNU1-17P-201ENST00000363022 152 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 Y_RNA.199-201ENST00000364014 102 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 RNU6-268P-201ENST00000364174 107 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 snoU2_19.4-201ENST00000364329 80 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 RNU6-1228P-201ENST00000391014 107 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 RNU6-381P-201ENST00000391259 108 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 RNU2-55P-201ENST00000411146 174 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 SNRPGP14-201ENST00000435400 219 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 RNU1-98P-201ENST00000458992 160 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 AL512310.8-201ENST00000550183 120 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 MIR3664-201ENST00000579074 99 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 AC006441.5-201ENST00000612680 209 ntBASIC1.34□□□□□ -2.19
APOBEC1P41238 RNU6-103P-201ENST00000363686 107 ntBASIC1.33□□□□□ -2.2
APOBEC1P41238 Y_RNA.200-201ENST00000364018 102 ntBASIC1.33□□□□□ -2.2
APOBEC1P41238 RNU6-997P-201ENST00000384725 107 ntBASIC1.33□□□□□ -2.2
APOBEC1P41238 AL606845.1-201ENST00000404881 255 ntBASIC1.33□□□□□ -2.2
APOBEC1P41238 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
APOBEC1P41238 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 RNU6-379P-201ENST00000363813 104 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 Y_RNA.515-201ENST00000384535 112 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 SNORD41-201ENST00000386967 70 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 MT-TT-201ENST00000387460 66 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
APOBEC1P41238 MIR764-201ENST00000390811 85 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 SNORA26-201ENST00000391286 122 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 SCARNA8-201ENST00000515924 131 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 RNU6-1299P-201ENST00000516316 100 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 RNY3P16-201ENST00000516338 101 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 RNU6-830P-201ENST00000516353 107 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 RNU6-453P-201ENST00000516819 85 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 AP001485.1-201ENST00000604799 199 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 AC141273.2-201ENST00000618989 130 ntBASIC1.32□□□□□ -2.2
APOBEC1P41238 Y_RNA.83-201ENST00000363005 113 ntBASIC1.31□□□□□ -2.2
APOBEC1P41238 Y_RNA.552-201ENST00000384665 112 ntBASIC1.31□□□□□ -2.2
APOBEC1P41238 RNU6-493P-201ENST00000391321 108 ntBASIC1.31□□□□□ -2.2
APOBEC1P41238 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.31□□□□□ -2.2
APOBEC1P41238 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
APOBEC1P41238 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.31□□□□□ -2.2
APOBEC1P41238 AC009779.6-201ENST00000603972 165 ntBASIC1.31□□□□□ -2.2
APOBEC1P41238 AL353997.5-201ENST00000618886 171 ntBASIC1.31□□□□□ -2.2
APOBEC1P41238 AL442644.1-201ENST00000454390 3105 ntBASIC1.31□□□□□ -2.2
APOBEC1P41238 Y_RNA.7-201ENST00000362352 102 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 Y_RNA.486-201ENST00000384398 107 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 Y_RNA.622-201ENST00000411091 108 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 RPL39P39-201ENST00000455840 151 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 RN7SKP88-201ENST00000516847 250 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 SNORA18.7-201ENST00000516910 131 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 SNORA74.3-201ENST00000517108 154 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 RNU6-365P-201ENST00000517113 106 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
APOBEC1P41238 MIR4744-201ENST00000581563 82 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 AL645939.4-201ENST00000604495 135 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 7SK.8-201ENST00000612110 250 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
APOBEC1P41238 7SK.11-201ENST00000615477 250 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 AC015726.2-201ENST00000620112 122 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 7SK.13-201ENST00000622040 250 ntBASIC1.3□□□□□ -2.2
APOBEC1P41238 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
APOBEC1P41238 Y_RNA.121-201ENST00000363309 113 ntBASIC1.29□□□□□ -2.2
APOBEC1P41238 RNU6-923P-201ENST00000364753 107 ntBASIC1.29□□□□□ -2.2
APOBEC1P41238 RNU6-728P-201ENST00000365375 104 ntBASIC1.29□□□□□ -2.2
APOBEC1P41238 Y_RNA.432-201ENST00000384087 111 ntBASIC1.29□□□□□ -2.2
APOBEC1P41238 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.29□□□□□ -2.2
APOBEC1P41238 RNU2-70P-201ENST00000410718 179 ntBASIC1.29□□□□□ -2.2
APOBEC1P41238 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.29□□□□□ -2.2
APOBEC1P41238 MIR4769-201ENST00000584126 77 ntBASIC1.29□□□□□ -2.2
APOBEC1P41238 Z83818.1-201ENST00000603584 150 ntBASIC1.29□□□□□ -2.2
APOBEC1P41238 MIR411-201ENST00000362239 96 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 Y_RNA.238-201ENST00000364441 102 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 SNORA79-201ENST00000408376 140 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 MIR548O-201ENST00000408583 114 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 SNRPGP8-201ENST00000454064 226 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 SNORD123-201ENST00000459473 70 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.28□□□□□ -2.2
APOBEC1P41238 RNU6-237P-201ENST00000515985 71 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 Y_RNA.666-201ENST00000516187 112 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 RNU6-947P-201ENST00000516264 106 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 SNORD111.1-201ENST00000516421 86 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 RNA5SP153-201ENST00000516498 76 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 RNU7-43P-201ENST00000516554 64 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 RNU6-504P-201ENST00000516568 104 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 RNU6-388P-201ENST00000517012 105 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 RNU6-389P-201ENST00000517048 105 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 CYP3A52P-201ENST00000563326 91 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 RNU2-4P-201ENST00000606190 192 ntBASIC1.28□□□□□ -2.2
APOBEC1P41238 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
APOBEC1P41238 ZNF209P-201ENST00000593450 2304 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 SNORD45.3-201ENST00000363836 72 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 RNU6-484P-201ENST00000384016 107 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 RNU4-70P-201ENST00000384579 139 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 MIR520C-201ENST00000385005 87 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 305.7 ms