Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNU6-693P-201ENST00000516134 107 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 RNA5SP285-201ENST00000516619 119 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 RNU7-149P-201ENST00000516739 59 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 AC136628.3-201ENST00000521868 290 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 MIR376A1-201ENST00000616574 68 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 MIR4272-201ENST00000635924 64 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SCN4AP35499 Y_RNA.39-201ENST00000362620 98 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 Y_RNA.58-201ENST00000362807 102 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 Y_RNA.152-201ENST00000363578 100 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 Y_RNA.154-201ENST00000363624 102 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 RNU4-50P-201ENST00000364361 141 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 RNY3P1-201ENST00000365085 102 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 RNY3-201ENST00000365484 102 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 SNORD42.2-201ENST00000365570 69 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 RNU6-1264P-201ENST00000383891 107 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 Y_RNA.445-201ENST00000384168 102 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 MIR518A1-201ENST00000385068 85 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 SNORD12-201ENST00000391002 90 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 RNU6-602P-201ENST00000411155 105 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 PMCHL1-202ENST00000423102 261 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 AL160004.2-201ENST00000432935 350 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 SNRPGP14-201ENST00000435400 219 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.5□□□□□ -2.33
SCN4AP35499 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.5□□□□□ -2.33
SCN4AP35499 MRPS35P2-201ENST00000508242 191 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 ACA64.5-201ENST00000516207 127 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 RNU7-4P-201ENST00000516961 62 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN4AP35499 AC090574.1-201ENST00000623186 233 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 AL008636.1-201ENST00000625038 1018 ntBASIC0.5□□□□□ -2.33
SCN4AP35499 AL391516.1-201ENST00000554380 2449 ntBASIC0.49□□□□□ -2.33
SCN4AP35499 RNU6-1115P-201ENST00000362490 106 ntBASIC0.49□□□□□ -2.33
SCN4AP35499 RNU4-90P-201ENST00000362773 141 ntBASIC0.49□□□□□ -2.33
SCN4AP35499 Y_RNA.439-201ENST00000384119 94 ntBASIC0.49□□□□□ -2.33
SCN4AP35499 SNORA53-201ENST00000391141 249 ntBASIC0.49□□□□□ -2.33
SCN4AP35499 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.49□□□□□ -2.33
SCN4AP35499 AC244098.3-201ENST00000424803 96 ntBASIC0.49□□□□□ -2.33
SCN4AP35499 AC002429.1-201ENST00000437672 148 ntBASIC0.49□□□□□ -2.33
SCN4AP35499 RNU7-181P-201ENST00000517234 74 ntBASIC0.49□□□□□ -2.33
SCN4AP35499 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.49□□□□□ -2.33
SCN4AP35499 MIR3145-201ENST00000580727 82 ntBASIC0.49□□□□□ -2.33
SCN4AP35499 RNU4-67P-201ENST00000364569 141 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 SNORA1.2-201ENST00000365189 134 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 SNORD63-201ENST00000384262 68 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 Y_RNA.551-201ENST00000384661 102 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 MIR215-201ENST00000384858 110 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 SNORA40.5-201ENST00000391061 128 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 MIR1912-201ENST00000410389 80 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 SNORA36B-201ENST00000410438 131 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 RNU2-14P-201ENST00000411053 191 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 RPL21P38-201ENST00000418090 167 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 RPL23AP91-201ENST00000569211 455 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 AC055872.1-201ENST00000570978 278 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 RNU6-708P-201ENST00000384217 107 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 MIR570-201ENST00000384917 97 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 MIR329-2-201ENST00000385029 84 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 SNORD11-201ENST00000459124 84 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 CYCTP-201ENST00000504253 315 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 RNU6-1143P-201ENST00000516125 104 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 RNU7-110P-201ENST00000516891 62 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 Y_RNA.715-201ENST00000517082 110 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 MIR8055-201ENST00000610739 97 ntBASIC0.48□□□□□ -2.33
SCN4AP35499 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
SCN4AP35499 MIR369-201ENST00000362155 70 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 RNU1-115P-201ENST00000365329 160 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 Y_RNA.579-201ENST00000390939 94 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 RNU6-855P-201ENST00000410395 104 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 RNU6-130P-201ENST00000411112 103 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 MTND4P19-201ENST00000446659 478 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 HSPE1P25-201ENST00000455484 251 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.47□□□□□ -2.33
SCN4AP35499 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.47□□□□□ -2.33
SCN4AP35499 RN7SKP295-201ENST00000517264 153 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 MIR4264-201ENST00000583520 66 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 uc_338.4-201ENST00000616635 176 ntBASIC0.47□□□□□ -2.33
SCN4AP35499 RNU6-580P-201ENST00000365159 107 ntBASIC0.46□□□□□ -2.34
SCN4AP35499 RNU6-926P-201ENST00000384075 107 ntBASIC0.46□□□□□ -2.34
SCN4AP35499 Y_RNA.587-201ENST00000391210 103 ntBASIC0.46□□□□□ -2.34
SCN4AP35499 AC006461.1-201ENST00000412637 326 ntBASIC0.46□□□□□ -2.34
SCN4AP35499 MTND4LP30-201ENST00000454092 297 ntBASIC0.46□□□□□ -2.34
SCN4AP35499 MIR1302-1-201ENST00000637932 143 ntBASIC0.46□□□□□ -2.34
SCN4AP35499 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SCN4AP35499 Y_RNA.813-201ENST00000364639 102 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 RNU6-110P-201ENST00000384508 104 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 SNORD38B-201ENST00000384690 67 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 RNU6-21P-201ENST00000384710 107 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 MIR605-201ENST00000385078 83 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 MTCO2P33-201ENST00000402100 465 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 MIR548O-201ENST00000408583 114 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 snoU13.16-201ENST00000459350 104 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 PDCD5P2-201ENST00000507570 312 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 AL133255.1-201ENST00000606374 441 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 AC106800.4-201ENST00000614905 153 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 SNORD38B-202ENST00000625943 69 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 AC134026.1-201ENST00000623249 2239 ntBASIC0.45□□□□□ -2.34
SCN4AP35499 RNU6-268P-201ENST00000364174 107 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 230.2 ms