Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 Y_RNA.694-201ENST00000516677 117 ntBASIC2.93□□□□□ -1.94
NEFMP07197 RNU6-1149P-201ENST00000516810 97 ntBASIC2.93□□□□□ -1.94
NEFMP07197 IGKV1-22-201ENST00000524313 326 ntBASIC2.93□□□□□ -1.94
NEFMP07197 AL591926.4-201ENST00000616895 298 ntBASIC2.93□□□□□ -1.94
NEFMP07197 AC009831.4-201ENST00000620744 325 ntBASIC2.93□□□□□ -1.94
NEFMP07197 U6.108-201ENST00000637764 58 ntBASIC2.93□□□□□ -1.94
NEFMP07197 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.93□□□□□ -1.94
NEFMP07197 Y_RNA.528-201ENST00000384575 108 ntBASIC2.92□□□□□ -1.94
NEFMP07197 RNU6-160P-201ENST00000384591 107 ntBASIC2.92□□□□□ -1.94
NEFMP07197 MIR548A2-201ENST00000384956 97 ntBASIC2.92□□□□□ -1.94
NEFMP07197 SNORD77.3-201ENST00000391113 65 ntBASIC2.92□□□□□ -1.94
NEFMP07197 RPS27P21-201ENST00000486977 252 ntBASIC2.92□□□□□ -1.94
NEFMP07197 RNU1-41P-201ENST00000516161 162 ntBASIC2.92□□□□□ -1.94
NEFMP07197 RNU1-48P-201ENST00000516400 162 ntBASIC2.92□□□□□ -1.94
NEFMP07197 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.92□□□□□ -1.94
NEFMP07197 AC104984.5-201ENST00000586878 94 ntBASIC2.92□□□□□ -1.94
NEFMP07197 AC022217.4-201ENST00000604389 163 ntBASIC2.92□□□□□ -1.94
NEFMP07197 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.92□□□□□ -1.94
NEFMP07197 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
NEFMP07197 MIR570-201ENST00000384917 97 ntBASIC2.91□□□□□ -1.94
NEFMP07197 MIR522-201ENST00000385071 87 ntBASIC2.91□□□□□ -1.94
NEFMP07197 AL049830.1-201ENST00000468034 425 ntBASIC2.91□□□□□ -1.94
NEFMP07197 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.91□□□□□ -1.94
NEFMP07197 MIR5197-201ENST00000583721 112 ntBASIC2.91□□□□□ -1.94
NEFMP07197 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.91□□□□□ -1.94
NEFMP07197 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.91□□□□□ -1.94
NEFMP07197 AP000553.5-201ENST00000641933 54 ntBASIC2.91□□□□□ -1.94
NEFMP07197 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NEFMP07197 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
NEFMP07197 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
NEFMP07197 SNORA1B-201ENST00000362535 133 ntBASIC2.9□□□□□ -1.95
NEFMP07197 Y_RNA.116-201ENST00000363292 103 ntBASIC2.9□□□□□ -1.95
NEFMP07197 Y_RNA.281-201ENST00000364774 94 ntBASIC2.9□□□□□ -1.95
NEFMP07197 SNORA25B-201ENST00000365507 128 ntBASIC2.9□□□□□ -1.95
NEFMP07197 SNORA8-201ENST00000384574 139 ntBASIC2.9□□□□□ -1.95
NEFMP07197 MIR518F-201ENST00000384973 87 ntBASIC2.9□□□□□ -1.95
NEFMP07197 SNORA48.3-201ENST00000391081 134 ntBASIC2.9□□□□□ -1.95
NEFMP07197 CST2P1-201ENST00000425770 87 ntBASIC2.9□□□□□ -1.95
NEFMP07197 COX6CP6-201ENST00000490840 228 ntBASIC2.9□□□□□ -1.95
NEFMP07197 SCARNA15-202ENST00000516881 127 ntBASIC2.9□□□□□ -1.95
NEFMP07197 MIR4648-201ENST00000580107 72 ntBASIC2.9□□□□□ -1.95
NEFMP07197 AC006254.2-201ENST00000603259 279 ntBASIC2.9□□□□□ -1.95
NEFMP07197 AL137067.1-201ENST00000615933 120 ntBASIC2.9□□□□□ -1.95
NEFMP07197 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.9□□□□□ -1.95
NEFMP07197 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
NEFMP07197 Y_RNA.410-201ENST00000383992 113 ntBASIC2.89□□□□□ -1.95
NEFMP07197 Y_RNA.495-201ENST00000384435 112 ntBASIC2.89□□□□□ -1.95
NEFMP07197 AL117342.1-201ENST00000404861 406 ntBASIC2.89□□□□□ -1.95
NEFMP07197 CALM2P4-201ENST00000430810 426 ntBASIC2.89□□□□□ -1.95
NEFMP07197 RPS29P24-201ENST00000486345 171 ntBASIC2.89□□□□□ -1.95
NEFMP07197 AC079804.2-201ENST00000490376 200 ntBASIC2.89□□□□□ -1.95
NEFMP07197 SNORA72.7-201ENST00000516349 94 ntBASIC2.89□□□□□ -1.95
NEFMP07197 RNU7-193P-201ENST00000516723 65 ntBASIC2.89□□□□□ -1.95
NEFMP07197 uc_338.28-201ENST00000612082 187 ntBASIC2.89□□□□□ -1.95
NEFMP07197 AC134878.1-201ENST00000619901 243 ntBASIC2.89□□□□□ -1.95
NEFMP07197 SNORD14E-201ENST00000364009 85 ntBASIC2.88□□□□□ -1.95
NEFMP07197 RNU6-442P-201ENST00000383968 104 ntBASIC2.88□□□□□ -1.95
NEFMP07197 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.88□□□□□ -1.95
NEFMP07197 AC104435.1-201ENST00000483483 166 ntBASIC2.88□□□□□ -1.95
NEFMP07197 SCARNA16.3-201ENST00000516595 184 ntBASIC2.88□□□□□ -1.95
NEFMP07197 AC007012.1-201ENST00000567192 175 ntBASIC2.88□□□□□ -1.95
NEFMP07197 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
NEFMP07197 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NEFMP07197 MIR450A1-201ENST00000362262 91 ntBASIC2.87□□□□□ -1.95
NEFMP07197 MIR548O-201ENST00000408583 114 ntBASIC2.87□□□□□ -1.95
NEFMP07197 RPS26P48-201ENST00000491713 339 ntBASIC2.87□□□□□ -1.95
NEFMP07197 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.87□□□□□ -1.95
NEFMP07197 MIR4762-201ENST00000585261 75 ntBASIC2.87□□□□□ -1.95
NEFMP07197 AC006441.5-201ENST00000612680 209 ntBASIC2.87□□□□□ -1.95
NEFMP07197 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.87□□□□□ -1.95
NEFMP07197 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NEFMP07197 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.86□□□□□ -1.95
NEFMP07197 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NEFMP07197 SNORA33-201ENST00000363664 130 ntBASIC2.86□□□□□ -1.95
NEFMP07197 SNORD114-6-201ENST00000364393 72 ntBASIC2.86□□□□□ -1.95
NEFMP07197 U8.5-201ENST00000364528 136 ntBASIC2.86□□□□□ -1.95
NEFMP07197 AC009238.1-201ENST00000442165 424 ntBASIC2.86□□□□□ -1.95
NEFMP07197 AC009237.6-201ENST00000446969 424 ntBASIC2.86□□□□□ -1.95
NEFMP07197 MIR514B-201ENST00000516774 80 ntBASIC2.86□□□□□ -1.95
NEFMP07197 U4atac.1-201ENST00000618345 95 ntBASIC2.86□□□□□ -1.95
NEFMP07197 Y_RNA.85-201ENST00000363014 111 ntBASIC2.85□□□□□ -1.95
NEFMP07197 SNORD68-201ENST00000363214 84 ntBASIC2.85□□□□□ -1.95
NEFMP07197 SNORA16B-201ENST00000364674 135 ntBASIC2.85□□□□□ -1.95
NEFMP07197 RNU6-1107P-201ENST00000364817 104 ntBASIC2.85□□□□□ -1.95
NEFMP07197 Y_RNA.366-201ENST00000365540 102 ntBASIC2.85□□□□□ -1.95
NEFMP07197 RNU6-1189P-201ENST00000383958 107 ntBASIC2.85□□□□□ -1.95
NEFMP07197 RNU6-106P-201ENST00000384405 107 ntBASIC2.85□□□□□ -1.95
NEFMP07197 MIR17-201ENST00000385012 84 ntBASIC2.85□□□□□ -1.95
NEFMP07197 SNORD12C-201ENST00000386307 89 ntBASIC2.85□□□□□ -1.95
NEFMP07197 MIR219B-201ENST00000637023 88 ntBASIC2.85□□□□□ -1.95
NEFMP07197 AL359851.1-201ENST00000569460 4997 ntBASIC2.85□□□□□ -1.95
NEFMP07197 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
NEFMP07197 snoU2-30.1-201ENST00000365012 70 ntBASIC2.84□□□□□ -1.95
NEFMP07197 RNU4-52P-201ENST00000384209 138 ntBASIC2.84□□□□□ -1.95
NEFMP07197 RNU1-148P-201ENST00000384472 162 ntBASIC2.84□□□□□ -1.95
NEFMP07197 AL163195.1-201ENST00000496941 348 ntBASIC2.84□□□□□ -1.95
NEFMP07197 Y_RNA.677-201ENST00000516401 85 ntBASIC2.84□□□□□ -1.95
NEFMP07197 MIR4679-1-201ENST00000637619 75 ntBASIC2.84□□□□□ -1.95
NEFMP07197 RNU6-1084P-201ENST00000362498 107 ntBASIC2.83□□□□□ -1.96
NEFMP07197 SNORA2.2-201ENST00000365473 135 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms