Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 RNU6-113P-201ENST00000516653 101 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 RNU6-1116P-201ENST00000517269 99 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 MTND5P34-201ENST00000568888 325 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.01□□□□□ -2.09
SPDEFO95238 AL627230.6-201ENST00000611129 280 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 AC027279.3-201ENST00000625055 122 ntBASIC2.01□□□□□ -2.09
SPDEFO95238 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
SPDEFO95238 SNORA80A-201ENST00000363922 136 ntBASIC2□□□□□ -2.09
SPDEFO95238 RNU6-1189P-201ENST00000383958 107 ntBASIC2□□□□□ -2.09
SPDEFO95238 RNU4-52P-201ENST00000384209 138 ntBASIC2□□□□□ -2.09
SPDEFO95238 RNU6-301P-201ENST00000384277 107 ntBASIC2□□□□□ -2.09
SPDEFO95238 RNU6-163P-201ENST00000384396 106 ntBASIC2□□□□□ -2.09
SPDEFO95238 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
SPDEFO95238 AL034345.1-201ENST00000407768 123 ntBASIC2□□□□□ -2.09
SPDEFO95238 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
SPDEFO95238 AC090255.1-201ENST00000495779 349 ntBASIC2□□□□□ -2.09
SPDEFO95238 IGKV1-22-201ENST00000524313 326 ntBASIC2□□□□□ -2.09
SPDEFO95238 MIR4319-201ENST00000577285 85 ntBASIC2□□□□□ -2.09
SPDEFO95238 AC006023.1-201ENST00000603944 259 ntBASIC2□□□□□ -2.09
SPDEFO95238 AL670379.3-201ENST00000605040 251 ntBASIC2□□□□□ -2.09
SPDEFO95238 AL442644.1-201ENST00000454390 3105 ntBASIC2□□□□□ -2.09
SPDEFO95238 SNORD114-30-201ENST00000364448 72 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 SNORA4.2-201ENST00000365313 147 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 MIR196B-201ENST00000384852 84 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 RNY4P18-201ENST00000391107 89 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 RNU6-938P-201ENST00000411285 103 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 CALM2P4-201ENST00000430810 426 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.99□□□□□ -2.09
SPDEFO95238 AC079804.2-201ENST00000490376 200 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 SNORD36C-201ENST00000516733 66 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 SUB1P4-201ENST00000566062 339 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 AC015726.2-201ENST00000620112 122 ntBASIC1.99□□□□□ -2.09
SPDEFO95238 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SPDEFO95238 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
SPDEFO95238 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SPDEFO95238 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SPDEFO95238 AP006437.1-201ENST00000641440 3685 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 Y_RNA.346-201ENST00000365385 112 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 SNORA2.2-201ENST00000365473 135 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 RNU6-424P-201ENST00000384367 105 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 SNORD38C-201ENST00000384381 69 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 MIR520A-201ENST00000384862 85 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 U8.16-201ENST00000391279 133 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 RNA5SP501-201ENST00000410990 112 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 RNU6-589P-201ENST00000516485 107 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 Y_RNA.709-201ENST00000516952 92 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 AC025166.1-201ENST00000612411 163 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.98□□□□□ -2.09
SPDEFO95238 AC016717.2-201ENST00000609089 5141 ntBASIC1.98□□□□□ -2.09
SPDEFO95238 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
SPDEFO95238 RNU6-153P-201ENST00000364422 104 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 RNU6-1031P-201ENST00000384773 107 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 MIR548A3-201ENST00000385297 97 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 AC087499.4-201ENST00000448505 178 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 AC104435.1-201ENST00000483483 166 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 RPS26P48-201ENST00000491713 339 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 RNA5SP320-201ENST00000516263 124 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 RNA5SP24-201ENST00000516478 95 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 RNA5SP168-201ENST00000516642 112 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 RNA5SP437-201ENST00000517249 129 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 AP003484.1-201ENST00000530974 250 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 AL033523.1-201ENST00000605153 153 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 AL391516.1-201ENST00000554380 2449 ntBASIC1.97□□□□□ -2.09
SPDEFO95238 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.96□□□□□ -2.09
SPDEFO95238 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.09
SPDEFO95238 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.96□□□□□ -2.1
SPDEFO95238 RNU6-833P-201ENST00000363486 107 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 RNU6-112P-201ENST00000363599 104 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 SNORA5B-201ENST00000363786 132 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 Y_RNA.440-201ENST00000384120 114 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 RNU6-296P-201ENST00000384608 107 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 AL359511.1-201ENST00000402970 211 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 NDUFB4P4-201ENST00000404822 243 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.96□□□□□ -2.1
SPDEFO95238 RPL23AP63-201ENST00000498752 471 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 RNU6-830P-201ENST00000516353 107 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 SCARNA16.3-201ENST00000516595 184 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.96□□□□□ -2.1
SPDEFO95238 AC067747.1-201ENST00000608026 250 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 AL121890.5-201ENST00000620848 304 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 MIR1291-201ENST00000627649 87 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 MTND5P18-201ENST00000445624 1801 ntBASIC1.96□□□□□ -2.1
SPDEFO95238 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SPDEFO95238 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SPDEFO95238 Y_RNA.366-201ENST00000365540 102 ntBASIC1.95□□□□□ -2.1
SPDEFO95238 MIR6817-201ENST00000615588 66 ntBASIC1.95□□□□□ -2.1
SPDEFO95238 AL137067.1-201ENST00000615933 120 ntBASIC1.95□□□□□ -2.1
SPDEFO95238 SNORA63.4-201ENST00000362763 126 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 SNORD116-21-201ENST00000384507 92 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 MIR1263-201ENST00000408324 86 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 RNU2-7P-201ENST00000410794 178 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 RNA5SP136-201ENST00000410906 107 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 AC015922.2-201ENST00000435593 184 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 RNU6-717P-201ENST00000459076 104 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 PDCD5P2-201ENST00000507570 312 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms