Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.27□□□□□ -2.61
PFDN1O60925 RNU2-11P-201ENST00000459191 187 ntBASIC-1.27□□□□□ -2.61
PFDN1O60925 SNORA25.16-201ENST00000516741 121 ntBASIC-1.27□□□□□ -2.61
PFDN1O60925 AC124303.1-201ENST00000605703 360 ntBASIC-1.27□□□□□ -2.61
PFDN1O60925 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 RNA5SP98-201ENST00000363158 137 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 RNU6-306P-201ENST00000384617 107 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 MIR516B1-201ENST00000385211 90 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 BX276092.1-201ENST00000427368 251 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 MTND3P16-201ENST00000452205 344 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 AC011352.1-201ENST00000512300 793 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 RNA5SP169-201ENST00000517268 117 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 AC060788.1-201ENST00000521318 469 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 AL662814.1-201ENST00000617364 121 ntBASIC-1.28□□□□□ -2.61
PFDN1O60925 RNU6-522P-201ENST00000364497 107 ntBASIC-1.29□□□□□ -2.62
PFDN1O60925 RNU6-597P-201ENST00000365620 102 ntBASIC-1.29□□□□□ -2.62
PFDN1O60925 RNU6-1323P-201ENST00000384025 107 ntBASIC-1.29□□□□□ -2.62
PFDN1O60925 RNU6-926P-201ENST00000384075 107 ntBASIC-1.29□□□□□ -2.62
PFDN1O60925 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.29□□□□□ -2.62
PFDN1O60925 MTCO2P19-201ENST00000427513 598 ntBASIC-1.29□□□□□ -2.62
PFDN1O60925 RNU6-408P-201ENST00000515910 100 ntBASIC-1.29□□□□□ -2.62
PFDN1O60925 MIR4273-201ENST00000582824 84 ntBASIC-1.29□□□□□ -2.62
PFDN1O60925 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.3□□□□□ -2.62
PFDN1O60925 RNU6-874P-201ENST00000362390 105 ntBASIC-1.3□□□□□ -2.62
PFDN1O60925 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.3□□□□□ -2.62
PFDN1O60925 MT-TQ-201ENST00000387372 72 ntBASIC-1.3□□□□□ -2.62
PFDN1O60925 MIR548O-201ENST00000408583 114 ntBASIC-1.3□□□□□ -2.62
PFDN1O60925 MTND2P14-201ENST00000482139 351 ntBASIC-1.3□□□□□ -2.62
PFDN1O60925 RNU6-311P-201ENST00000516224 102 ntBASIC-1.3□□□□□ -2.62
PFDN1O60925 RNU7-53P-201ENST00000516705 60 ntBASIC-1.3□□□□□ -2.62
PFDN1O60925 MRPS36P3-201ENST00000519284 130 ntBASIC-1.3□□□□□ -2.62
PFDN1O60925 MIR5589-201ENST00000579442 60 ntBASIC-1.3□□□□□ -2.62
PFDN1O60925 AL596211.1-201ENST00000569873 2277 ntBASIC-1.31□□□□□ -2.62
PFDN1O60925 FGF7P2-201ENST00000332473 296 ntBASIC-1.31□□□□□ -2.62
PFDN1O60925 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.31□□□□□ -2.62
PFDN1O60925 RNU6-961P-201ENST00000363893 105 ntBASIC-1.31□□□□□ -2.62
PFDN1O60925 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.31□□□□□ -2.62
PFDN1O60925 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.31□□□□□ -2.62
PFDN1O60925 RNU6-966P-201ENST00000516479 104 ntBASIC-1.31□□□□□ -2.62
PFDN1O60925 RNA5SP66-201ENST00000517178 101 ntBASIC-1.31□□□□□ -2.62
PFDN1O60925 RNU7-161P-201ENST00000517289 62 ntBASIC-1.31□□□□□ -2.62
PFDN1O60925 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.31□□□□□ -2.62
PFDN1O60925 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.31□□□□□ -2.62
PFDN1O60925 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.31□□□□□ -2.62
PFDN1O60925 MIR5188-201ENST00000583467 113 ntBASIC-1.31□□□□□ -2.62
PFDN1O60925 RNU4-75P-201ENST00000364621 146 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 MIR514A2-201ENST00000385131 88 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 MIR514A3-201ENST00000385132 88 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 MIR190B-201ENST00000401119 79 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 SNORD110-201ENST00000408189 75 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 RNA5SP237-201ENST00000410414 113 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.32□□□□□ -2.62
PFDN1O60925 RNU7-104P-201ENST00000459398 79 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 AP003072.1-201ENST00000531740 145 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.32□□□□□ -2.62
PFDN1O60925 AC073869.9-201ENST00000641610 120 ntBASIC-1.32□□□□□ -2.62
PFDN1O60925 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.33□□□□□ -2.62
PFDN1O60925 MIR604-201ENST00000384880 94 ntBASIC-1.33□□□□□ -2.62
PFDN1O60925 SNORD12B-201ENST00000410433 91 ntBASIC-1.33□□□□□ -2.62
PFDN1O60925 AC006210.1-201ENST00000424882 111 ntBASIC-1.33□□□□□ -2.62
PFDN1O60925 USP9YP30-201ENST00000430729 455 ntBASIC-1.33□□□□□ -2.62
PFDN1O60925 RNU6-436P-201ENST00000516171 114 ntBASIC-1.33□□□□□ -2.62
PFDN1O60925 RNA5SP480-201ENST00000516840 109 ntBASIC-1.33□□□□□ -2.62
PFDN1O60925 AC107308.1-201ENST00000615897 301 ntBASIC-1.33□□□□□ -2.62
PFDN1O60925 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.34□□□□□ -2.62
PFDN1O60925 RNU6-938P-201ENST00000411285 103 ntBASIC-1.34□□□□□ -2.62
PFDN1O60925 RNU6-261P-201ENST00000459506 102 ntBASIC-1.34□□□□□ -2.62
PFDN1O60925 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.34□□□□□ -2.62
PFDN1O60925 AC060780.3-201ENST00000589464 80 ntBASIC-1.34□□□□□ -2.62
PFDN1O60925 AC063944.3-201ENST00000609969 533 ntBASIC-1.34□□□□□ -2.62
PFDN1O60925 AC097520.1-201ENST00000624435 385 ntBASIC-1.34□□□□□ -2.62
PFDN1O60925 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 MIR224-201ENST00000384889 81 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 MIR1912-201ENST00000410389 80 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 MTND3P21-201ENST00000433774 331 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 RPS29P24-201ENST00000486345 171 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.35□□□□□ -2.63
PFDN1O60925 SNORA25.13-201ENST00000516395 103 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 RNU6-759P-201ENST00000516740 103 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 RNU7-116P-201ENST00000516940 62 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.35□□□□□ -2.63
PFDN1O60925 ZNF519P2-201ENST00000557032 169 ntBASIC-1.35□□□□□ -2.63
PFDN1O60925 SNORA27-201ENST00000384323 126 ntBASIC-1.36□□□□□ -2.63
PFDN1O60925 RNY3P10-201ENST00000384764 102 ntBASIC-1.36□□□□□ -2.63
PFDN1O60925 MTND3P7-201ENST00000474435 343 ntBASIC-1.36□□□□□ -2.63
PFDN1O60925 MTCO2P4-201ENST00000517968 247 ntBASIC-1.36□□□□□ -2.63
PFDN1O60925 AF246928.1-201ENST00000623768 87 ntBASIC-1.36□□□□□ -2.63
PFDN1O60925 RNU4-73P-201ENST00000363164 141 ntBASIC-1.37□□□□□ -2.63
PFDN1O60925 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.37□□□□□ -2.63
PFDN1O60925 RNY1P7-201ENST00000384743 110 ntBASIC-1.37□□□□□ -2.63
PFDN1O60925 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.37□□□□□ -2.63
PFDN1O60925 SNORA40.5-201ENST00000391061 128 ntBASIC-1.37□□□□□ -2.63
PFDN1O60925 MIR548I3-201ENST00000408378 149 ntBASIC-1.37□□□□□ -2.63
PFDN1O60925 MTATP6P17-201ENST00000431030 672 ntBASIC-1.37□□□□□ -2.63
PFDN1O60925 RNU7-125P-201ENST00000458760 62 ntBASIC-1.37□□□□□ -2.63
PFDN1O60925 AC010655.3-201ENST00000478818 450 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms