Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR29C-201ENST00000385231 88 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 RNA5SP344-201ENST00000411081 104 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 SNRPGP10-201ENST00000432323 225 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 AC233266.1-201ENST00000454518 96 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.88□□□□□ -1.95
GRIN3BO60391 Y_RNA.690-201ENST00000516603 95 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 AP002004.2-201ENST00000531656 154 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 AC087685.1-201ENST00000587507 141 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 AC242852.1-201ENST00000612151 96 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 AL442128.1-201ENST00000615151 90 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
GRIN3BO60391 AC244015.1-201ENST00000622301 99 ntBASIC2.88□□□□□ -1.95
GRIN3BO60391 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
GRIN3BO60391 AC007336.1-201ENST00000576365 3828 ntBASIC2.87□□□□□ -1.95
GRIN3BO60391 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
GRIN3BO60391 SNORA8-201ENST00000384574 139 ntBASIC2.87□□□□□ -1.95
GRIN3BO60391 MIR5007-201ENST00000583098 95 ntBASIC2.87□□□□□ -1.95
GRIN3BO60391 AC131055.1-201ENST00000584626 316 ntBASIC2.87□□□□□ -1.95
GRIN3BO60391 AL035470.1-201ENST00000622571 220 ntBASIC2.87□□□□□ -1.95
GRIN3BO60391 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.87□□□□□ -1.95
GRIN3BO60391 AL161431.1-201ENST00000618966 4205 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
GRIN3BO60391 Y_RNA.66-201ENST00000362862 102 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 RNU6-23P-201ENST00000363283 107 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 SNORA38-201ENST00000363946 132 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 RNU6-647P-201ENST00000364243 107 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 Y_RNA.267-201ENST00000364679 109 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 SNORA67.3-201ENST00000384366 140 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 Y_RNA.486-201ENST00000384398 107 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
GRIN3BO60391 SNORD78.1-201ENST00000390866 65 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 RNA5SP225-201ENST00000410874 135 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 RPL39P40-201ENST00000445481 146 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.86□□□□□ -1.95
GRIN3BO60391 AL163195.1-201ENST00000496941 348 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 RNU6-365P-201ENST00000517113 106 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.86□□□□□ -1.95
GRIN3BO60391 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 AC015726.2-201ENST00000620112 122 ntBASIC2.86□□□□□ -1.95
GRIN3BO60391 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
GRIN3BO60391 RNU6-862P-201ENST00000362804 105 ntBASIC2.85□□□□□ -1.95
GRIN3BO60391 Y_RNA.346-201ENST00000365385 112 ntBASIC2.85□□□□□ -1.95
GRIN3BO60391 Y_RNA.714-201ENST00000517065 90 ntBASIC2.85□□□□□ -1.95
GRIN3BO60391 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.85□□□□□ -1.95
GRIN3BO60391 AC008507.4-201ENST00000585464 127 ntBASIC2.85□□□□□ -1.95
GRIN3BO60391 AC005786.1-201ENST00000588553 154 ntBASIC2.85□□□□□ -1.95
GRIN3BO60391 AL365205.2-201ENST00000594586 68 ntBASIC2.85□□□□□ -1.95
GRIN3BO60391 MIR6845-201ENST00000613182 61 ntBASIC2.85□□□□□ -1.95
GRIN3BO60391 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
GRIN3BO60391 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
GRIN3BO60391 SNORA1B-201ENST00000362535 133 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 RNU6-228P-201ENST00000362700 106 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 SNORA51.5-201ENST00000384126 131 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 SNORD12C-201ENST00000386307 89 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 RNU6-440P-201ENST00000390882 105 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 SNORA11.4-201ENST00000408823 129 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 AC099677.2-201ENST00000436385 175 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 MRPS17P9-201ENST00000511924 393 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 RNU6-109P-201ENST00000516364 107 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 RNU6-184P-201ENST00000516514 107 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 RNU6-504P-201ENST00000516568 104 ntBASIC2.84□□□□□ -1.95
GRIN3BO60391 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.84□□□□□ -1.95
GRIN3BO60391 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
GRIN3BO60391 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
GRIN3BO60391 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
GRIN3BO60391 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.83□□□□□ -1.96
GRIN3BO60391 RNU1-58P-201ENST00000362413 163 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 Y_RNA.52-201ENST00000362760 96 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 RNU1-148P-201ENST00000384472 162 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 CALM2P4-201ENST00000430810 426 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 FTH1P12-201ENST00000432137 551 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 AL049830.1-201ENST00000468034 425 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 TRMT112P2-201ENST00000512910 132 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 RNA5SP137-201ENST00000516833 135 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 AC007012.1-201ENST00000567192 175 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 AC134878.1-201ENST00000619901 243 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 AC022513.1-201ENST00000624512 117 ntBASIC2.83□□□□□ -1.96
GRIN3BO60391 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
GRIN3BO60391 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
GRIN3BO60391 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
GRIN3BO60391 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
GRIN3BO60391 Y_RNA.219-201ENST00000364232 113 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 SNORD24-201ENST00000383884 75 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 MIR624-201ENST00000385217 97 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 RNU6-972P-201ENST00000391208 107 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 SNORA19.1-201ENST00000410656 129 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 AC109327.2-201ENST00000448339 378 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.82□□□□□ -1.96
GRIN3BO60391 SNORA40.13-201ENST00000516379 120 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 AC007751.1-201ENST00000529260 376 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 MIR5092-201ENST00000583139 88 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 MIR4762-201ENST00000585261 75 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 AL022345.2-201ENST00000606307 135 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 RNU6-94P-201ENST00000607728 107 ntBASIC2.82□□□□□ -1.96
GRIN3BO60391 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.82□□□□□ -1.96
GRIN3BO60391 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
GRIN3BO60391 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.81□□□□□ -1.96
GRIN3BO60391 MIR126-201ENST00000362291 85 ntBASIC2.81□□□□□ -1.96
GRIN3BO60391 RNU6-1014P-201ENST00000383940 103 ntBASIC2.81□□□□□ -1.96
GRIN3BO60391 RNU6-813P-201ENST00000384691 107 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 221.7 ms