Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR4305-201ENST00000583252 102 ntBASIC2.86□□□□□ -1.95
SOX1O00570 U1.23-201ENST00000610293 146 ntBASIC2.86□□□□□ -1.95
SOX1O00570 RNU1-68P-201ENST00000615382 146 ntBASIC2.86□□□□□ -1.95
SOX1O00570 AC015726.2-201ENST00000620112 122 ntBASIC2.86□□□□□ -1.95
SOX1O00570 U1.39-201ENST00000621562 146 ntBASIC2.86□□□□□ -1.95
SOX1O00570 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
SOX1O00570 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SOX1O00570 FAM35CP-201ENST00000554755 2470 ntBASIC2.85□□□□□ -1.95
SOX1O00570 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.85□□□□□ -1.95
SOX1O00570 AC008264.2-201ENST00000610193 3731 ntBASIC2.85□□□□□ -1.95
SOX1O00570 SNORD38C-201ENST00000384381 69 ntBASIC2.85□□□□□ -1.95
SOX1O00570 SNORA51.10-201ENST00000384418 136 ntBASIC2.85□□□□□ -1.95
SOX1O00570 AC084364.2-201ENST00000546924 395 ntBASIC2.85□□□□□ -1.95
SOX1O00570 MIR3683-201ENST00000580847 82 ntBASIC2.85□□□□□ -1.95
SOX1O00570 SNORA28-201ENST00000606769 126 ntBASIC2.85□□□□□ -1.95
SOX1O00570 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.85□□□□□ -1.95
SOX1O00570 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SOX1O00570 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
SOX1O00570 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.84□□□□□ -1.95
SOX1O00570 Y_RNA.78-201ENST00000362970 110 ntBASIC2.84□□□□□ -1.95
SOX1O00570 SNORD73B-201ENST00000364394 72 ntBASIC2.84□□□□□ -1.95
SOX1O00570 RNU6-805P-201ENST00000365643 106 ntBASIC2.84□□□□□ -1.95
SOX1O00570 RNA5SP109-201ENST00000391010 116 ntBASIC2.84□□□□□ -1.95
SOX1O00570 MIR3163-201ENST00000581592 73 ntBASIC2.84□□□□□ -1.95
SOX1O00570 MIR8054-201ENST00000620877 86 ntBASIC2.84□□□□□ -1.95
SOX1O00570 AC091932.4-201ENST00000623386 200 ntBASIC2.84□□□□□ -1.95
SOX1O00570 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.84□□□□□ -1.95
SOX1O00570 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.84□□□□□ -1.96
SOX1O00570 ICE2P2-201ENST00000483823 2787 ntBASIC2.83□□□□□ -1.96
SOX1O00570 AL596211.1-201ENST00000569873 2277 ntBASIC2.83□□□□□ -1.96
SOX1O00570 RNU6-1104P-201ENST00000384723 104 ntBASIC2.83□□□□□ -1.96
SOX1O00570 MIR548D2-201ENST00000384955 97 ntBASIC2.83□□□□□ -1.96
SOX1O00570 AC114811.1-201ENST00000507207 168 ntBASIC2.83□□□□□ -1.96
SOX1O00570 RNU7-123P-201ENST00000515911 60 ntBASIC2.83□□□□□ -1.96
SOX1O00570 AC005786.1-201ENST00000588553 154 ntBASIC2.83□□□□□ -1.96
SOX1O00570 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.83□□□□□ -1.96
SOX1O00570 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.83□□□□□ -1.96
SOX1O00570 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SOX1O00570 MIR148B-201ENST00000362252 99 ntBASIC2.82□□□□□ -1.96
SOX1O00570 Y_RNA.344-201ENST00000365381 112 ntBASIC2.82□□□□□ -1.96
SOX1O00570 RNU6-163P-201ENST00000384396 106 ntBASIC2.82□□□□□ -1.96
SOX1O00570 RNA5SP282-201ENST00000516355 108 ntBASIC2.82□□□□□ -1.96
SOX1O00570 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.82□□□□□ -1.96
SOX1O00570 Y_RNA.818-201ENST00000618813 71 ntBASIC2.82□□□□□ -1.96
SOX1O00570 AC027279.3-201ENST00000625055 122 ntBASIC2.82□□□□□ -1.96
SOX1O00570 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SOX1O00570 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SOX1O00570 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
SOX1O00570 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SOX1O00570 RNU6-1019P-201ENST00000364424 107 ntBASIC2.81□□□□□ -1.96
SOX1O00570 RNU6-1131P-201ENST00000364955 107 ntBASIC2.81□□□□□ -1.96
SOX1O00570 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SOX1O00570 SNORA64-201ENST00000384674 134 ntBASIC2.81□□□□□ -1.96
SOX1O00570 MIR499A-201ENST00000384903 122 ntBASIC2.81□□□□□ -1.96
SOX1O00570 MIR627-201ENST00000384979 97 ntBASIC2.81□□□□□ -1.96
SOX1O00570 MIR590-201ENST00000385008 97 ntBASIC2.81□□□□□ -1.96
SOX1O00570 MIR29C-201ENST00000385231 88 ntBASIC2.81□□□□□ -1.96
SOX1O00570 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.81□□□□□ -1.96
SOX1O00570 STAG3L5P-204ENST00000443759 179 ntBASIC2.81□□□□□ -1.96
SOX1O00570 RN7SKP43-201ENST00000516173 320 ntBASIC2.81□□□□□ -1.96
SOX1O00570 RNU6-844P-201ENST00000517175 102 ntBASIC2.81□□□□□ -1.96
SOX1O00570 AC078899.2-201ENST00000595282 212 ntBASIC2.81□□□□□ -1.96
SOX1O00570 AC022513.1-201ENST00000624512 117 ntBASIC2.81□□□□□ -1.96
SOX1O00570 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SOX1O00570 RNU1-58P-201ENST00000362413 163 ntBASIC2.8□□□□□ -1.96
SOX1O00570 SNORA27-201ENST00000384323 126 ntBASIC2.8□□□□□ -1.96
SOX1O00570 RPL23AP42-201ENST00000471152 471 ntBASIC2.8□□□□□ -1.96
SOX1O00570 AC002984.1-201ENST00000591692 448 ntBASIC2.8□□□□□ -1.96
SOX1O00570 MIR8070-201ENST00000616510 88 ntBASIC2.8□□□□□ -1.96
SOX1O00570 U4.3-201ENST00000621047 82 ntBASIC2.8□□□□□ -1.96
SOX1O00570 MIR2052-201ENST00000636055 55 ntBASIC2.8□□□□□ -1.96
SOX1O00570 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SOX1O00570 MIRLET7C-201ENST00000362160 84 ntBASIC2.79□□□□□ -1.96
SOX1O00570 MIR342-201ENST00000362212 99 ntBASIC2.79□□□□□ -1.96
SOX1O00570 RNU1-17P-201ENST00000363022 152 ntBASIC2.79□□□□□ -1.96
SOX1O00570 Y_RNA.558-201ENST00000384685 113 ntBASIC2.79□□□□□ -1.96
SOX1O00570 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX1O00570 RPS27P29-201ENST00000463110 252 ntBASIC2.79□□□□□ -1.96
SOX1O00570 RNU6-109P-201ENST00000516364 107 ntBASIC2.79□□□□□ -1.96
SOX1O00570 RNU2-35P-201ENST00000516446 142 ntBASIC2.79□□□□□ -1.96
SOX1O00570 RNU6-184P-201ENST00000516514 107 ntBASIC2.79□□□□□ -1.96
SOX1O00570 RNU6-1116P-201ENST00000517269 99 ntBASIC2.79□□□□□ -1.96
SOX1O00570 AC022523.2-201ENST00000561045 150 ntBASIC2.79□□□□□ -1.96
SOX1O00570 AL162726.3-218ENST00000636401 95 ntBASIC2.79□□□□□ -1.96
SOX1O00570 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.78□□□□□ -1.96
SOX1O00570 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.78□□□□□ -1.96
SOX1O00570 SNORD115-3-201ENST00000363100 82 ntBASIC2.78□□□□□ -1.96
SOX1O00570 RNU6-49P-201ENST00000384256 107 ntBASIC2.78□□□□□ -1.96
SOX1O00570 RNU6-424P-201ENST00000384367 105 ntBASIC2.78□□□□□ -1.96
SOX1O00570 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.78□□□□□ -1.96
SOX1O00570 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.78□□□□□ -1.96
SOX1O00570 AL035398.1-201ENST00000430869 322 ntBASIC2.78□□□□□ -1.96
SOX1O00570 AC069257.2-201ENST00000441819 155 ntBASIC2.78□□□□□ -1.96
SOX1O00570 AC092185.1-201ENST00000491371 97 ntBASIC2.78□□□□□ -1.96
SOX1O00570 RNU6-158P-201ENST00000517104 100 ntBASIC2.78□□□□□ -1.96
SOX1O00570 AC245166.1-201ENST00000521012 253 ntBASIC2.78□□□□□ -1.96
SOX1O00570 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
SOX1O00570 HSPE1P19-201ENST00000603327 295 ntBASIC2.78□□□□□ -1.96
SOX1O00570 AC069114.2-201ENST00000604699 304 ntBASIC2.78□□□□□ -1.96
SOX1O00570 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.78□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms