Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL162274.2-201ENST00000614406 332 ntBASIC2.41□□□□□ -2.02
SHISA3A0PJX4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.41□□□□□ -2.02
SHISA3A0PJX4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHISA3A0PJX4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SHISA3A0PJX4 AC009487.2-201ENST00000420969 6821 ntBASIC2.4□□□□□ -2.02
SHISA3A0PJX4 MIR26A1-201ENST00000362205 77 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 SNORA4.2-201ENST00000365313 147 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 Y_RNA.369-201ENST00000365568 117 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 SNORA70.7-201ENST00000384159 133 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 MT-TI-201ENST00000387365 69 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 NDUFB4P4-201ENST00000404822 243 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 RNU2-7P-201ENST00000410794 178 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 RNA5SP492-201ENST00000411330 114 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.4□□□□□ -2.03
SHISA3A0PJX4 RNVU1-2-201ENST00000516326 135 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 RNU2-35P-201ENST00000516446 142 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 AC068339.1-201ENST00000526965 141 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 MIR5009-201ENST00000578736 100 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 AL513423.1-201ENST00000621695 132 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
SHISA3A0PJX4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SHISA3A0PJX4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.39□□□□□ -2.03
SHISA3A0PJX4 MIR342-201ENST00000362212 99 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 RNA5SP374-201ENST00000362939 125 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 U8.6-201ENST00000364939 135 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 RNU1-109P-201ENST00000383960 147 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 Y_RNA.544-201ENST00000384650 113 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 MIR136-201ENST00000385207 82 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 RNA5SP144-201ENST00000410846 116 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 RPL23AP63-201ENST00000498752 471 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 SNORA72.7-201ENST00000516349 94 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 MIR5582-201ENST00000579697 68 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 MIR4658-201ENST00000584344 65 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 AP001318.4-201ENST00000616637 121 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 MIR4679-1-201ENST00000637619 75 ntBASIC2.39□□□□□ -2.03
SHISA3A0PJX4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SHISA3A0PJX4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.39□□□□□ -2.03
SHISA3A0PJX4 ICE2P2-201ENST00000483823 2787 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHISA3A0PJX4 MIR422A-201ENST00000362286 90 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 RNU6-112P-201ENST00000363599 104 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 SNORA71.1-201ENST00000364523 117 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 RNU4-16P-201ENST00000364737 141 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 Y_RNA.348-201ENST00000365403 103 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHISA3A0PJX4 DEFA7P-201ENST00000382676 285 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHISA3A0PJX4 RNU6-1104P-201ENST00000384723 104 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 MIR128-1-201ENST00000384921 82 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 AL022718.1-201ENST00000412004 84 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.38□□□□□ -2.03
SHISA3A0PJX4 RNU6-893P-201ENST00000458841 100 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 RNA5SP341-201ENST00000516261 117 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 RNA5SP437-201ENST00000517249 129 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 MIR4709-201ENST00000577272 72 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SHISA3A0PJX4 U1.36-201ENST00000620684 176 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 AC021613.1-201ENST00000623880 111 ntBASIC2.38□□□□□ -2.03
SHISA3A0PJX4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.38□□□□□ -2.03
SHISA3A0PJX4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.38□□□□□ -2.03
SHISA3A0PJX4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHISA3A0PJX4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.37□□□□□ -2.03
SHISA3A0PJX4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHISA3A0PJX4 Y_RNA.78-201ENST00000362970 110 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 Y_RNA.344-201ENST00000365381 112 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 RNU6-296P-201ENST00000384608 107 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 MIR634-201ENST00000385208 97 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 SNORA48.2-201ENST00000390926 124 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 RNA5SP210-201ENST00000391034 120 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 RNU2-11P-201ENST00000459191 187 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 snoU13.27-201ENST00000459278 104 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 RNU7-34P-201ENST00000459394 64 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 UBL5P3-201ENST00000475112 231 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 RNU7-181P-201ENST00000517234 74 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 SNORA31.26-201ENST00000517250 137 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 AC022523.2-201ENST00000561045 150 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 AL162726.3-218ENST00000636401 95 ntBASIC2.37□□□□□ -2.03
SHISA3A0PJX4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.37□□□□□ -2.03
SHISA3A0PJX4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
SHISA3A0PJX4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SHISA3A0PJX4 Y_RNA.494-201ENST00000384432 111 ntBASIC2.36□□□□□ -2.03
SHISA3A0PJX4 RNU6-905P-201ENST00000384434 107 ntBASIC2.36□□□□□ -2.03
SHISA3A0PJX4 MIR1912-201ENST00000410389 80 ntBASIC2.36□□□□□ -2.03
SHISA3A0PJX4 RNA5SP501-201ENST00000410990 112 ntBASIC2.36□□□□□ -2.03
SHISA3A0PJX4 RNA5SP270-201ENST00000411361 118 ntBASIC2.36□□□□□ -2.03
SHISA3A0PJX4 HSPE1P19-201ENST00000603327 295 ntBASIC2.36□□□□□ -2.03
SHISA3A0PJX4 AC021506.2-201ENST00000612354 169 ntBASIC2.36□□□□□ -2.03
SHISA3A0PJX4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.36□□□□□ -2.03
SHISA3A0PJX4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.36□□□□□ -2.03
SHISA3A0PJX4 AC096644.4-201ENST00000563417 2912 ntBASIC2.35□□□□□ -2.03
SHISA3A0PJX4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SHISA3A0PJX4 MIR6073-201ENST00000352083 89 ntBASIC2.35□□□□□ -2.03
SHISA3A0PJX4 Y_RNA.370-201ENST00000365589 108 ntBASIC2.35□□□□□ -2.03
SHISA3A0PJX4 MIR660-201ENST00000385235 97 ntBASIC2.35□□□□□ -2.03
SHISA3A0PJX4 RPS23P4-201ENST00000487908 423 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms