Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC245008.1-201ENST00000608123 476 ntBASIC-1.1□□□□□ -2.59
TRAV13-1A0A0B4J241 AC019193.3-201ENST00000609144 554 ntBASIC-1.1□□□□□ -2.59
TRAV13-1A0A0B4J241 AC004467.1-201ENST00000615678 330 ntBASIC-1.1□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6-254P-201ENST00000363377 107 ntBASIC-1.11□□□□□ -2.59
TRAV13-1A0A0B4J241 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.11□□□□□ -2.59
TRAV13-1A0A0B4J241 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.11□□□□□ -2.59
TRAV13-1A0A0B4J241 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.11□□□□□ -2.59
TRAV13-1A0A0B4J241 U8.15-201ENST00000390947 134 ntBASIC-1.11□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6-311P-201ENST00000516224 102 ntBASIC-1.11□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU7-25P-201ENST00000516544 62 ntBASIC-1.11□□□□□ -2.59
TRAV13-1A0A0B4J241 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.11□□□□□ -2.59
TRAV13-1A0A0B4J241 MIR4491-201ENST00000581087 68 ntBASIC-1.11□□□□□ -2.59
TRAV13-1A0A0B4J241 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 SNORA72.3-201ENST00000365074 132 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 SNORA72.6-201ENST00000384520 129 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 AC108059.2-201ENST00000434626 151 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 AC010424.1-201ENST00000506336 297 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 AC074198.2-201ENST00000508153 258 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU7-116P-201ENST00000516940 62 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 MIR5188-201ENST00000583467 113 ntBASIC-1.12□□□□□ -2.59
TRAV13-1A0A0B4J241 FGF7P2-201ENST00000332473 296 ntBASIC-1.13□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.13□□□□□ -2.59
TRAV13-1A0A0B4J241 U8.6-201ENST00000364939 135 ntBASIC-1.13□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6-601P-201ENST00000384540 107 ntBASIC-1.13□□□□□ -2.59
TRAV13-1A0A0B4J241 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.13□□□□□ -2.59
TRAV13-1A0A0B4J241 RNA5SP66-201ENST00000517178 101 ntBASIC-1.13□□□□□ -2.59
TRAV13-1A0A0B4J241 AC024405.2-202ENST00000532731 184 ntBASIC-1.13□□□□□ -2.59
TRAV13-1A0A0B4J241 MIR4273-201ENST00000582824 84 ntBASIC-1.13□□□□□ -2.59
TRAV13-1A0A0B4J241 AP001282.2-201ENST00000616149 309 ntBASIC-1.13□□□□□ -2.59
TRAV13-1A0A0B4J241 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6-926P-201ENST00000384075 107 ntBASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 MIR514A2-201ENST00000385131 88 ntBASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 MIR514A3-201ENST00000385132 88 ntBASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 MIR190B-201ENST00000401119 79 ntBASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 MTND3P21-201ENST00000433774 331 ntBASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 AL662814.1-201ENST00000617364 121 ntBASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 AC105081.1-201ENST00000617727 106 ntBASIC-1.14□□□□□ -2.59
TRAV13-1A0A0B4J241 RNA5SP245-201ENST00000364239 121 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6-522P-201ENST00000364497 107 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6-318P-201ENST00000384283 103 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 AC096949.1-201ENST00000412047 152 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 AL353193.1-201ENST00000421444 268 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 MTCO2P19-201ENST00000427513 598 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 AC083904.1-201ENST00000487828 231 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 AC011352.1-201ENST00000512300 793 ntBASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.15□□□□□ -2.59
TRAV13-1A0A0B4J241 RNU6-596P-201ENST00000365395 98 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 MIR548O-201ENST00000408583 114 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 RNA5SP237-201ENST00000410414 113 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 MTND3P16-201ENST00000452205 344 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU6-138P-201ENST00000515952 107 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 MTCO2P4-201ENST00000517968 247 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 IGKV1-22-201ENST00000524313 326 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 AC055872.1-201ENST00000570978 278 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 AC018638.8-201ENST00000588755 281 ntBASIC-1.16□□□□□ -2.6
TRAV13-1A0A0B4J241 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 RNY1P7-201ENST00000384743 110 ntBASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 MIR516B1-201ENST00000385211 90 ntBASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 AC006210.1-201ENST00000424882 111 ntBASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 MTATP6P17-201ENST00000431030 672 ntBASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 SNORA25.13-201ENST00000516395 103 ntBASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 AC245884.10-201ENST00000597355 337 ntBASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 AP003357.1-201ENST00000604497 148 ntBASIC-1.17□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.18□□□□□ -2.6
TRAV13-1A0A0B4J241 SNORA40.5-201ENST00000391061 128 ntBASIC-1.18□□□□□ -2.6
TRAV13-1A0A0B4J241 SNORD110-201ENST00000408189 75 ntBASIC-1.18□□□□□ -2.6
TRAV13-1A0A0B4J241 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.18□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU7-87P-201ENST00000459343 62 ntBASIC-1.18□□□□□ -2.6
TRAV13-1A0A0B4J241 RPS29P24-201ENST00000486345 171 ntBASIC-1.18□□□□□ -2.6
TRAV13-1A0A0B4J241 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.18□□□□□ -2.6
TRAV13-1A0A0B4J241 MIR2681-201ENST00000581814 105 ntBASIC-1.18□□□□□ -2.6
TRAV13-1A0A0B4J241 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.19□□□□□ -2.6
TRAV13-1A0A0B4J241 SNORA63.5-201ENST00000363548 123 ntBASIC-1.19□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU6-47P-201ENST00000383866 107 ntBASIC-1.19□□□□□ -2.6
TRAV13-1A0A0B4J241 MIR635-201ENST00000384830 98 ntBASIC-1.19□□□□□ -2.6
TRAV13-1A0A0B4J241 MIR1265-201ENST00000408444 86 ntBASIC-1.19□□□□□ -2.6
TRAV13-1A0A0B4J241 SNORD12B-201ENST00000410433 91 ntBASIC-1.19□□□□□ -2.6
TRAV13-1A0A0B4J241 BX276092.1-201ENST00000427368 251 ntBASIC-1.19□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU6-408P-201ENST00000515910 100 ntBASIC-1.19□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU6-436P-201ENST00000516171 114 ntBASIC-1.19□□□□□ -2.6
TRAV13-1A0A0B4J241 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 221.9 ms