Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 SNORD114-22-201ENST00000365423 72 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 AC245047.8-201ENST00000456455 284 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 snoU13.25-201ENST00000458945 104 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 AC098869.1-201ENST00000481627 292 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 NDUFA4P2-201ENST00000489989 244 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 RNU6-764P-201ENST00000516396 105 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 AC131281.1-201ENST00000522984 164 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 MIR2681-201ENST00000581814 105 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 MIR3171-201ENST00000584270 74 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 AL391903.3-201ENST00000612158 163 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 AC007742.2-201ENST00000618226 398 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 MIR6767-201ENST00000637302 66 ntBASIC0.92□□□□□ -2.26
ATG4BQ9Y4P1 SNORA25.3-201ENST00000363205 127 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 Y_RNA.210-201ENST00000364161 110 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 Y_RNA.380-201ENST00000365663 111 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 RNU6-442P-201ENST00000383968 104 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 SNORD38C-201ENST00000384381 69 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 SNORA75.2-201ENST00000391138 150 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 SNORA75.3-201ENST00000391231 150 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 RNU6-121P-201ENST00000410525 99 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 MTCO1P5-201ENST00000433573 344 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 SNORD123-201ENST00000459473 70 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 RNU7-41P-201ENST00000515917 61 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 MIR4764-201ENST00000580680 88 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 MIR4452-201ENST00000583004 71 ntBASIC0.91□□□□□ -2.26
ATG4BQ9Y4P1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
ATG4BQ9Y4P1 AL442644.1-201ENST00000454390 3105 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.158-201ENST00000363651 101 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.224-201ENST00000364308 111 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.330-201ENST00000365230 109 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-969P-201ENST00000383900 105 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.455-201ENST00000384230 98 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-763P-201ENST00000390865 106 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.581-201ENST00000391017 97 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 ELOCP20-201ENST00000422460 345 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 RNU7-21P-201ENST00000459430 62 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 SNORD124-201ENST00000459577 104 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 RPS26P48-201ENST00000491713 339 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-113P-201ENST00000516653 101 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 AC087685.1-201ENST00000587507 141 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 AL512605.2-201ENST00000592972 256 ntBASIC0.9□□□□□ -2.27
ATG4BQ9Y4P1 MIR103A2-201ENST00000362154 78 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.19-201ENST00000362462 99 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.136-201ENST00000363444 102 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-770P-201ENST00000363929 105 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-899P-201ENST00000363947 107 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 RNU1-36P-201ENST00000365130 165 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-806P-201ENST00000365147 105 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-290P-201ENST00000365212 101 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-514P-201ENST00000384208 107 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 MIR215-201ENST00000384858 110 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 RPL21P38-201ENST00000418090 167 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 RNU7-90P-201ENST00000459216 62 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 AC020661.2-201ENST00000560114 134 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 AC113195.1-201ENST00000579952 141 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 MIR4680-201ENST00000580906 66 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 AC037487.3-201ENST00000606668 112 ntBASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.89□□□□□ -2.27
ATG4BQ9Y4P1 SNORA25.1-201ENST00000362326 128 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.26-201ENST00000362539 101 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 RNA5SP264-201ENST00000363115 107 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-1205P-201ENST00000363625 106 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.214-201ENST00000364201 112 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 SNORD72-201ENST00000390994 80 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 SNORA53-201ENST00000391141 249 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.673-201ENST00000516306 88 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 RNU7-43P-201ENST00000516554 64 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 AL356055.1-201ENST00000602528 446 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 AL355297.3-201ENST00000604082 446 ntBASIC0.88□□□□□ -2.27
ATG4BQ9Y4P1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 snoU2_19.2-201ENST00000363024 80 ntBASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-674P-201ENST00000363831 107 ntBASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.541-201ENST00000384640 113 ntBASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 RNU2-31P-201ENST00000516954 155 ntBASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 AC008507.4-201ENST00000585464 127 ntBASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 AC015726.2-201ENST00000620112 122 ntBASIC0.87□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.64-201ENST00000362845 102 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.152-201ENST00000363578 100 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 RNA5SP48-201ENST00000363969 126 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.202-201ENST00000364083 110 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-268P-201ENST00000364174 107 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 Y_RNA.269-201ENST00000364685 89 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-662P-201ENST00000384253 104 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 MIR520E-201ENST00000384867 87 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 SNORD28B-201ENST00000390993 75 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 MIR942-201ENST00000401111 86 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-383P-201ENST00000410864 94 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 BTF3P11-201ENST00000426582 477 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 SNORD11-201ENST00000459124 84 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 RNU6-1007P-201ENST00000516586 107 ntBASIC0.86□□□□□ -2.27
ATG4BQ9Y4P1 AP003716.2-201ENST00000528260 108 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms