Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC027279.3-201ENST00000625055 122 ntBASIC2.41□□□□□ -2.02
PPARGC1AQ9UBK2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PPARGC1AQ9UBK2 AC005336.3-201ENST00000623833 2679 ntBASIC2.41□□□□□ -2.02
PPARGC1AQ9UBK2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
PPARGC1AQ9UBK2 RNA5SP289-201ENST00000362332 137 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 Y_RNA.71-201ENST00000362892 104 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 RNY1P11-201ENST00000363759 113 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 SNORD50B-201ENST00000364995 70 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 SNORD61-201ENST00000384252 73 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 SNORA80E-201ENST00000384744 137 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 MIR520A-201ENST00000384862 85 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 MIR891A-201ENST00000401237 79 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-1211P-201ENST00000459179 105 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 CYCTP-201ENST00000504253 315 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 RPL23AP94-201ENST00000512518 302 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 Y_RNA.692-201ENST00000516627 105 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 SNORD45.4-201ENST00000516629 73 ntBASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
PPARGC1AQ9UBK2 RNA5SP205-201ENST00000364653 136 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 SNORD18B-201ENST00000365659 72 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 MIR548A2-201ENST00000384956 97 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 AL603914.1-201ENST00000401964 204 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 AL034345.1-201ENST00000407768 123 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 SNRPGP14-201ENST00000435400 219 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 MTATP6P21-201ENST00000440681 189 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 RN7SKP179-201ENST00000516126 217 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 MIR4298-201ENST00000584380 73 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 AL365222.1-201ENST00000614661 98 ntBASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.39□□□□□ -2.03
PPARGC1AQ9UBK2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-1336P-201ENST00000383886 109 ntBASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 SNORA22C-201ENST00000384614 134 ntBASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 STAG3L5P-204ENST00000443759 179 ntBASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 RNU4-57P-201ENST00000515980 135 ntBASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-693P-201ENST00000516134 107 ntBASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 Y_RNA.666-201ENST00000516187 112 ntBASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 RNA5SP481-201ENST00000516814 122 ntBASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.38□□□□□ -2.03
PPARGC1AQ9UBK2 Y_RNA.52-201ENST00000362760 96 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-268P-201ENST00000364174 107 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 Y_RNA.410-201ENST00000383992 113 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 MIR518F-201ENST00000384973 87 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 MIR17-201ENST00000385012 84 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 RNU4-53P-201ENST00000410828 140 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 AL158823.1-201ENST00000418441 478 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 RNVU1-2-201ENST00000516326 135 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 SNORA31.10-201ENST00000516482 106 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-1270P-201ENST00000517128 108 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 AC134878.1-201ENST00000619901 243 ntBASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.37□□□□□ -2.03
PPARGC1AQ9UBK2 AC008555.8-201ENST00000623602 2168 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 MIRLET7G-201ENST00000362280 84 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 U8.1-201ENST00000362843 134 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 Y_RNA.280-201ENST00000364765 112 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 SNORA1-201ENST00000384107 130 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 MIR548O-201ENST00000408583 114 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 RNA5SP501-201ENST00000410990 112 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 Y_RNA.629-201ENST00000411368 105 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-1333P-201ENST00000516162 93 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 RNA5SP281-201ENST00000516504 135 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 MIR3129-201ENST00000581095 76 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 MIR4435-1-201ENST00000582552 80 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 MIR6766-201ENST00000622641 72 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.36□□□□□ -2.03
PPARGC1AQ9UBK2 AL596028.1-201ENST00000326971 197 ntBASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 MIRLET7C-201ENST00000362160 84 ntBASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-112P-201ENST00000363599 104 ntBASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 SNORA16B-201ENST00000364674 135 ntBASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 CYCSP49-201ENST00000420810 319 ntBASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 AF228730.3-201ENST00000436691 102 ntBASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 AC090049.2-201ENST00000550377 109 ntBASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 MIR3121-201ENST00000579680 77 ntBASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 AL590808.1-201ENST00000618696 141 ntBASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PPARGC1AQ9UBK2 AL442644.1-201ENST00000454390 3105 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-834P-201ENST00000362367 110 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-833P-201ENST00000363486 107 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-424P-201ENST00000384367 105 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-163P-201ENST00000384396 106 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 Y_RNA.563-201ENST00000384707 108 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 SNORD77.3-201ENST00000391113 65 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 RNU6-659P-201ENST00000516454 104 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 Y_RNA.690-201ENST00000516603 95 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 RNU2-60P-201ENST00000517290 128 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 MIR5197-201ENST00000583721 112 ntBASIC2.34□□□□□ -2.03
PPARGC1AQ9UBK2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
PPARGC1AQ9UBK2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.34□□□□□ -2.04
PPARGC1AQ9UBK2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 Y_RNA.273-201ENST00000364703 102 ntBASIC2.33□□□□□ -2.04
PPARGC1AQ9UBK2 RNU6-296P-201ENST00000384608 107 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 235.9 ms