Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 Y_RNA.571-201ENST00000384753 98 ntBASIC1.65□□□□□ -2.15
Q9N2J8 SNORA40.18-201ENST00000391200 128 ntBASIC1.65□□□□□ -2.15
Q9N2J8 RNU6-918P-201ENST00000391219 106 ntBASIC1.65□□□□□ -2.15
Q9N2J8 AL606845.1-201ENST00000404881 255 ntBASIC1.65□□□□□ -2.15
Q9N2J8 HMGN2P23-201ENST00000456759 269 ntBASIC1.65□□□□□ -2.15
Q9N2J8 SCARNA8-201ENST00000515924 131 ntBASIC1.65□□□□□ -2.15
Q9N2J8 RNU6-126P-201ENST00000516685 103 ntBASIC1.65□□□□□ -2.15
Q9N2J8 RNU7-149P-201ENST00000516739 59 ntBASIC1.65□□□□□ -2.15
Q9N2J8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.65□□□□□ -2.15
Q9N2J8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.65□□□□□ -2.15
Q9N2J8 MIR3198-2-201ENST00000577868 80 ntBASIC1.65□□□□□ -2.15
Q9N2J8 SNORA77B-201ENST00000578179 125 ntBASIC1.65□□□□□ -2.15
Q9N2J8 MIR4744-201ENST00000581563 82 ntBASIC1.65□□□□□ -2.15
Q9N2J8 RNU2-4P-201ENST00000606190 192 ntBASIC1.65□□□□□ -2.15
Q9N2J8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.65□□□□□ -2.15
Q9N2J8 Y_RNA.29-201ENST00000362570 113 ntBASIC1.64□□□□□ -2.15
Q9N2J8 RNU6-1138P-201ENST00000365359 106 ntBASIC1.64□□□□□ -2.15
Q9N2J8 RNU6-442P-201ENST00000383968 104 ntBASIC1.64□□□□□ -2.15
Q9N2J8 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
Q9N2J8 MT-TT-201ENST00000387460 66 ntBASIC1.64□□□□□ -2.15
Q9N2J8 RNU6-453P-201ENST00000516819 85 ntBASIC1.64□□□□□ -2.15
Q9N2J8 SNORA81.3-201ENST00000517283 198 ntBASIC1.64□□□□□ -2.15
Q9N2J8 AC024614.2-201ENST00000577584 372 ntBASIC1.64□□□□□ -2.15
Q9N2J8 MIR4778-201ENST00000577635 80 ntBASIC1.64□□□□□ -2.15
Q9N2J8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Q9N2J8 RNU6-47P-201ENST00000383866 107 ntBASIC1.63□□□□□ -2.15
Q9N2J8 MIR513A1-201ENST00000385138 129 ntBASIC1.63□□□□□ -2.15
Q9N2J8 U8.13-201ENST00000390842 128 ntBASIC1.63□□□□□ -2.15
Q9N2J8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.63□□□□□ -2.15
Q9N2J8 RNU2-55P-201ENST00000411146 174 ntBASIC1.63□□□□□ -2.15
Q9N2J8 MTND5P15-201ENST00000434246 349 ntBASIC1.63□□□□□ -2.15
Q9N2J8 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
Q9N2J8 Y_RNA.797-201ENST00000515977 94 ntBASIC1.63□□□□□ -2.15
Q9N2J8 AP002392.1-201ENST00000537692 208 ntBASIC1.63□□□□□ -2.15
Q9N2J8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.63□□□□□ -2.15
Q9N2J8 DEFB122-202ENST00000569013 197 ntBASIC1.63□□□□□ -2.15
Q9N2J8 MIR3668-201ENST00000582138 75 ntBASIC1.63□□□□□ -2.15
Q9N2J8 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
Q9N2J8 ICE2P2-201ENST00000483823 2787 ntBASIC1.62□□□□□ -2.15
Q9N2J8 Y_RNA.182-201ENST00000363880 111 ntBASIC1.62□□□□□ -2.15
Q9N2J8 Y_RNA.233-201ENST00000364407 101 ntBASIC1.62□□□□□ -2.15
Q9N2J8 RNU6-728P-201ENST00000365375 104 ntBASIC1.62□□□□□ -2.15
Q9N2J8 RNU6-578P-201ENST00000390980 103 ntBASIC1.62□□□□□ -2.15
Q9N2J8 SNORD72-201ENST00000390994 80 ntBASIC1.62□□□□□ -2.15
Q9N2J8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.62□□□□□ -2.15
Q9N2J8 snoU13.15-201ENST00000459407 104 ntBASIC1.62□□□□□ -2.15
Q9N2J8 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
Q9N2J8 RNU6-295P-201ENST00000516901 104 ntBASIC1.62□□□□□ -2.15
Q9N2J8 SUMO2P16-201ENST00000519475 264 ntBASIC1.62□□□□□ -2.15
Q9N2J8 AC072026.1-201ENST00000605023 201 ntBASIC1.62□□□□□ -2.15
Q9N2J8 Pinc.1-201ENST00000616452 154 ntBASIC1.62□□□□□ -2.15
Q9N2J8 RNU6-199P-201ENST00000362954 107 ntBASIC1.61□□□□□ -2.15
Q9N2J8 RNA5SP259-201ENST00000365541 109 ntBASIC1.61□□□□□ -2.15
Q9N2J8 Y_RNA.432-201ENST00000384087 111 ntBASIC1.61□□□□□ -2.15
Q9N2J8 MIR452-201ENST00000385020 85 ntBASIC1.61□□□□□ -2.15
Q9N2J8 SNORA26-201ENST00000391286 122 ntBASIC1.61□□□□□ -2.15
Q9N2J8 RN7SKP51-201ENST00000410781 304 ntBASIC1.61□□□□□ -2.15
Q9N2J8 AC093850.1-201ENST00000454121 251 ntBASIC1.61□□□□□ -2.15
Q9N2J8 snoU13.26-201ENST00000459452 105 ntBASIC1.61□□□□□ -2.15
Q9N2J8 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
Q9N2J8 RNU6-1299P-201ENST00000516316 100 ntBASIC1.61□□□□□ -2.15
Q9N2J8 RNU6-182P-201ENST00000516970 105 ntBASIC1.61□□□□□ -2.15
Q9N2J8 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
Q9N2J8 AC108706.1-201ENST00000611053 297 ntBASIC1.61□□□□□ -2.15
Q9N2J8 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
Q9N2J8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Q9N2J8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Q9N2J8 SNORA11.2-201ENST00000408318 127 ntBASIC1.6□□□□□ -2.15
Q9N2J8 SNORA79-201ENST00000408376 140 ntBASIC1.6□□□□□ -2.15
Q9N2J8 Y_RNA.622-201ENST00000411091 108 ntBASIC1.6□□□□□ -2.15
Q9N2J8 RPL31P63-201ENST00000422565 375 ntBASIC1.6□□□□□ -2.15
Q9N2J8 RNU7-120P-201ENST00000459334 63 ntBASIC1.6□□□□□ -2.15
Q9N2J8 AC005908.1-201ENST00000468701 347 ntBASIC1.6□□□□□ -2.15
Q9N2J8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.6□□□□□ -2.15
Q9N2J8 AC109810.1-201ENST00000534066 224 ntBASIC1.6□□□□□ -2.15
Q9N2J8 MIR3122-201ENST00000577243 73 ntBASIC1.6□□□□□ -2.15
Q9N2J8 MIR8063-201ENST00000621930 81 ntBASIC1.6□□□□□ -2.15
Q9N2J8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
Q9N2J8 Y_RNA.75-201ENST00000362927 97 ntBASIC1.59□□□□□ -2.15
Q9N2J8 SNORD45.3-201ENST00000363836 72 ntBASIC1.59□□□□□ -2.15
Q9N2J8 RNU6-275P-201ENST00000364910 107 ntBASIC1.59□□□□□ -2.15
Q9N2J8 SNORD38C-201ENST00000384381 69 ntBASIC1.59□□□□□ -2.15
Q9N2J8 MIR1261-201ENST00000408659 82 ntBASIC1.59□□□□□ -2.15
Q9N2J8 AL121914.1-201ENST00000450188 156 ntBASIC1.59□□□□□ -2.15
Q9N2J8 HSPE1P24-201ENST00000450782 238 ntBASIC1.59□□□□□ -2.15
Q9N2J8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.59□□□□□ -2.15
Q9N2J8 AC004792.1-201ENST00000614523 137 ntBASIC1.59□□□□□ -2.15
Q9N2J8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Q9N2J8 Y_RNA.412-201ENST00000384001 104 ntBASIC1.58□□□□□ -2.16
Q9N2J8 RNU6-484P-201ENST00000384016 107 ntBASIC1.58□□□□□ -2.16
Q9N2J8 MIR15B-201ENST00000385045 98 ntBASIC1.58□□□□□ -2.16
Q9N2J8 RNU4-43P-201ENST00000410628 137 ntBASIC1.58□□□□□ -2.16
Q9N2J8 RNU2-70P-201ENST00000410718 179 ntBASIC1.58□□□□□ -2.16
Q9N2J8 SNRPGP8-201ENST00000454064 226 ntBASIC1.58□□□□□ -2.16
Q9N2J8 RNA5SP153-201ENST00000516498 76 ntBASIC1.58□□□□□ -2.16
Q9N2J8 RNU6-365P-201ENST00000517113 106 ntBASIC1.58□□□□□ -2.16
Q9N2J8 AC022559.1-201ENST00000520905 205 ntBASIC1.58□□□□□ -2.16
Q9N2J8 MRPS18CP4-201ENST00000535821 231 ntBASIC1.58□□□□□ -2.16
Q9N2J8 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
Q9N2J8 MIR502-201ENST00000606349 86 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 257.2 ms