Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU6-1046P-201ENST00000516538 107 ntBASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 AP003716.2-201ENST00000528260 108 ntBASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 AC004817.2-201ENST00000561794 651 ntBASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 MIR548S-201ENST00000581352 82 ntBASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 MIR548AR-201ENST00000582191 57 ntBASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 AC131055.1-201ENST00000584626 316 ntBASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 RPS29P30-201ENST00000600975 111 ntBASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 RBM11P1-201ENST00000604951 799 ntBASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 AC010205.1-201ENST00000616668 449 ntBASIC0.65□□□□□ -2.31
TM9SF3Q9HD45 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 RNU4-73P-201ENST00000363164 141 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 RNU6-1209P-201ENST00000363655 107 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.203-201ENST00000364106 102 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.252-201ENST00000364556 101 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.263-201ENST00000364659 114 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 RNU6-1323P-201ENST00000384025 107 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.419-201ENST00000384041 102 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.471-201ENST00000384312 102 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.551-201ENST00000384661 102 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 MIR193B-201ENST00000384907 83 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 MIR1302-7-201ENST00000408841 72 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 MTND5P20-201ENST00000448677 143 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 RNU6-397P-201ENST00000516226 104 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 RNU7-115P-201ENST00000516433 55 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 AC022616.4-201ENST00000522985 181 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 AC109810.1-201ENST00000534066 224 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 AC012433.1-201ENST00000588916 398 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 AL133255.1-201ENST00000606374 441 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 MIR548AY-201ENST00000617669 107 ntBASIC0.64□□□□□ -2.31
TM9SF3Q9HD45 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.383-201ENST00000383855 97 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 RNU6-21P-201ENST00000384710 107 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 RNU6-710P-201ENST00000410424 105 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 AL035398.1-201ENST00000430869 322 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 AC005534.2-201ENST00000431047 433 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.702-201ENST00000516843 96 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 AC025627.3-201ENST00000582078 182 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 MIR4801-201ENST00000582704 82 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 AP003357.1-201ENST00000604497 148 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 AL121655.1-201ENST00000605811 308 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 SEPT14P17-201ENST00000617978 177 ntBASIC0.63□□□□□ -2.31
TM9SF3Q9HD45 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 MIR369-201ENST00000362155 70 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.31-201ENST00000362574 102 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 SNORD114-23-201ENST00000363536 72 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 RNU6-801P-201ENST00000364087 105 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.439-201ENST00000384119 94 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.456-201ENST00000384232 111 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 RNU6-102P-201ENST00000384485 104 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 SNORD89-201ENST00000390981 114 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 SNORD72-201ENST00000390994 80 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 SNORA26.5-201ENST00000391215 123 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 RNU7-141P-201ENST00000459304 62 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 HMGN1P10-201ENST00000474557 553 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 SNORA40.14-201ENST00000516543 86 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 AC040926.1-201ENST00000530195 238 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 AC127455.1-201ENST00000565496 145 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 JPX_2.1-201ENST00000614161 69 ntBASIC0.62□□□□□ -2.31
TM9SF3Q9HD45 AC068700.1-201ENST00000565862 3754 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 SNORD14E-201ENST00000364009 85 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.462-201ENST00000384268 102 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 AC236972.2-201ENST00000434979 310 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 SNRPGP14-201ENST00000435400 219 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 U8.20-201ENST00000459445 131 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 AC113410.1-201ENST00000505029 247 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 MTND3P22-201ENST00000510932 243 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 RNU7-181P-201ENST00000517234 74 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 RPL23AP91-201ENST00000569211 455 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 MIR1273G-201ENST00000577677 100 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 AC005357.1-201ENST00000588399 301 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 7SK.10-201ENST00000621414 298 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 AC008133.2-201ENST00000624540 351 ntBASIC0.61□□□□□ -2.31
TM9SF3Q9HD45 Y_RNA.197-201ENST00000364004 102 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 RNU6-450P-201ENST00000364654 107 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 RNU1-115P-201ENST00000365329 160 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 MTCO2P33-201ENST00000402100 465 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 AL603910.2-201ENST00000407268 136 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 SNORA36B-201ENST00000410438 131 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 HMGN2P32-201ENST00000444648 269 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 RNU6-976P-201ENST00000516086 111 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 RNU7-43P-201ENST00000516554 64 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 RNU7-116P-201ENST00000516940 62 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 AC036111.3-201ENST00000526389 112 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 Z83818.1-201ENST00000603584 150 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 AL080274.1-201ENST00000605565 220 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 uc_338.22-201ENST00000622722 187 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 MIR6516-201ENST00000630554 81 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 MIR4251-201ENST00000635819 61 ntBASIC0.6□□□□□ -2.31
TM9SF3Q9HD45 AC010487.4-201ENST00000637027 61 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms