Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 AC108729.3-201ENST00000513484 108 ntBASIC2.07□□□□□ -2.08
CCDC8Q9H0W5 RNU6-388P-201ENST00000517012 105 ntBASIC2.07□□□□□ -2.08
CCDC8Q9H0W5 RNU6-389P-201ENST00000517048 105 ntBASIC2.07□□□□□ -2.08
CCDC8Q9H0W5 SNORD3E-202ENST00000627253 216 ntBASIC2.07□□□□□ -2.08
CCDC8Q9H0W5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC8Q9H0W5 Y_RNA.229-201ENST00000364347 113 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 Y_RNA.238-201ENST00000364441 102 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 RNA5SP190-201ENST00000365222 118 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 RNU6-1138P-201ENST00000365359 106 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 RNU6-439P-201ENST00000384188 106 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 RNU6-163P-201ENST00000384396 106 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 RNU6-381P-201ENST00000391259 108 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 MLLT10P1-201ENST00000418346 262 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 RNU7-12P-201ENST00000516030 62 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 RNU6-794P-201ENST00000517261 64 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 MIR3618-201ENST00000580330 88 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 AC008507.4-201ENST00000585464 127 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC8Q9H0W5 AL359851.1-201ENST00000569460 4997 ntBASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 SNORD14E-201ENST00000364009 85 ntBASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 Y_RNA.435-201ENST00000384095 112 ntBASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 MIR676-201ENST00000390702 67 ntBASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 HMGN2P38-201ENST00000423806 265 ntBASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 SNORD45.4-201ENST00000516629 73 ntBASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 AC015688.6-201ENST00000577737 104 ntBASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 MIR4255-201ENST00000579351 72 ntBASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC8Q9H0W5 MIR411-201ENST00000362239 96 ntBASIC2.04□□□□□ -2.08
CCDC8Q9H0W5 RNU6-200P-201ENST00000364743 107 ntBASIC2.04□□□□□ -2.08
CCDC8Q9H0W5 MIR934-201ENST00000401241 83 ntBASIC2.04□□□□□ -2.08
CCDC8Q9H0W5 AL138752.1-201ENST00000452964 351 ntBASIC2.04□□□□□ -2.08
CCDC8Q9H0W5 NDUFA4P2-201ENST00000489989 244 ntBASIC2.04□□□□□ -2.08
CCDC8Q9H0W5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC8Q9H0W5 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
CCDC8Q9H0W5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.04□□□□□ -2.08
CCDC8Q9H0W5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC8Q9H0W5 Y_RNA.4-201ENST00000362333 112 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 Y_RNA.7-201ENST00000362352 102 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 RNU6-442P-201ENST00000383968 104 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 MIR452-201ENST00000385020 85 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 RNA5SP247-201ENST00000411181 105 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 RNU6-1053P-201ENST00000515930 101 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 SNORD77.4-201ENST00000516158 81 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 CBX3P4-201ENST00000538909 354 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 MIR502-201ENST00000606349 86 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 AC078938.1-201ENST00000620993 318 ntBASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC8Q9H0W5 ICE2P2-201ENST00000483823 2787 ntBASIC2.03□□□□□ -2.09
CCDC8Q9H0W5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 RNU4-10P-201ENST00000364383 140 ntBASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 SNORD50B-201ENST00000364995 70 ntBASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 SNORA26-201ENST00000391286 122 ntBASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 AC114811.1-201ENST00000507207 168 ntBASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 AC130289.1-201ENST00000577321 73 ntBASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 snoU13.31-201ENST00000607291 104 ntBASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 uc_338.20-201ENST00000621563 178 ntBASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 AC095038.3-201ENST00000634439 195 ntBASIC2.02□□□□□ -2.09
CCDC8Q9H0W5 AL442644.1-201ENST00000454390 3105 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 RNU6-199P-201ENST00000362954 107 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 Y_RNA.785-201ENST00000384290 109 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 MIR513A1-201ENST00000385138 129 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 MIR802-201ENST00000390235 94 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 SNORA67.5-201ENST00000391036 107 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 SNORA17.3-201ENST00000391159 129 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 AC108667.1-201ENST00000428618 249 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 AL160236.1-201ENST00000556317 195 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 AC024614.2-201ENST00000577584 372 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 MIR4744-201ENST00000581563 82 ntBASIC2.01□□□□□ -2.09
CCDC8Q9H0W5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC8Q9H0W5 RNU6-1020P-201ENST00000363684 107 ntBASIC2□□□□□ -2.09
CCDC8Q9H0W5 snoU2_19.4-201ENST00000364329 80 ntBASIC2□□□□□ -2.09
CCDC8Q9H0W5 Y_RNA.308-201ENST00000365043 101 ntBASIC2□□□□□ -2.09
CCDC8Q9H0W5 SNORA2.2-201ENST00000365473 135 ntBASIC2□□□□□ -2.09
CCDC8Q9H0W5 MIR15B-201ENST00000385045 98 ntBASIC2□□□□□ -2.09
CCDC8Q9H0W5 RNU1-78P-201ENST00000391248 165 ntBASIC2□□□□□ -2.09
CCDC8Q9H0W5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2□□□□□ -2.09
CCDC8Q9H0W5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2□□□□□ -2.09
CCDC8Q9H0W5 RNA5SP153-201ENST00000516498 76 ntBASIC2□□□□□ -2.09
CCDC8Q9H0W5 MIR4422-201ENST00000581938 83 ntBASIC2□□□□□ -2.09
CCDC8Q9H0W5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2□□□□□ -2.09
CCDC8Q9H0W5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CCDC8Q9H0W5 MIR302D-201ENST00000362275 68 ntBASIC1.99□□□□□ -2.09
CCDC8Q9H0W5 Y_RNA.297-201ENST00000364950 91 ntBASIC1.99□□□□□ -2.09
CCDC8Q9H0W5 MIR653-201ENST00000385279 96 ntBASIC1.99□□□□□ -2.09
CCDC8Q9H0W5 Y_RNA.587-201ENST00000391210 103 ntBASIC1.99□□□□□ -2.09
CCDC8Q9H0W5 RNU7-149P-201ENST00000516739 59 ntBASIC1.99□□□□□ -2.09
CCDC8Q9H0W5 AL049861.1-201ENST00000603130 150 ntBASIC1.99□□□□□ -2.09
CCDC8Q9H0W5 AC006441.5-201ENST00000612680 209 ntBASIC1.99□□□□□ -2.09
CCDC8Q9H0W5 MIR378A-201ENST00000362177 66 ntBASIC1.98□□□□□ -2.09
CCDC8Q9H0W5 SNORD38C-201ENST00000384381 69 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms