Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SNORA12.1-201ENST00000390873 148 ntBASIC1.97□□□□□ -2.09
RTFDC1Q9BY42 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
RTFDC1Q9BY42 AC079140.2-201ENST00000506193 142 ntBASIC1.97□□□□□ -2.09
RTFDC1Q9BY42 RNU6-1023P-201ENST00000516137 106 ntBASIC1.97□□□□□ -2.09
RTFDC1Q9BY42 RNU6-126P-201ENST00000516685 103 ntBASIC1.97□□□□□ -2.09
RTFDC1Q9BY42 MIR3618-201ENST00000580330 88 ntBASIC1.97□□□□□ -2.09
RTFDC1Q9BY42 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RTFDC1Q9BY42 Y_RNA.117-201ENST00000363294 101 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 RNU6-1209P-201ENST00000363655 107 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 SNORD14E-201ENST00000364009 85 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 Y_RNA.336-201ENST00000365307 109 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 MIR452-201ENST00000385020 85 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 MIR518E-201ENST00000385252 88 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 AC245517.4-201ENST00000448601 281 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 AC009474.2-201ENST00000451383 136 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 RNA5SP445-201ENST00000515889 115 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 RNU6-322P-201ENST00000516010 103 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 RPL23AP91-201ENST00000569211 455 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 AL442067.1-201ENST00000613261 223 ntBASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RTFDC1Q9BY42 MIRLET7C-201ENST00000362160 84 ntBASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 Y_RNA.122-201ENST00000363331 96 ntBASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 SNORA20.1-201ENST00000364790 130 ntBASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 Y_RNA.304-201ENST00000365011 112 ntBASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 RNU6-338P-201ENST00000383888 105 ntBASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 MIR15B-201ENST00000385045 98 ntBASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 RNU1-78P-201ENST00000391248 165 ntBASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 AC095038.3-201ENST00000634439 195 ntBASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RTFDC1Q9BY42 Y_RNA.118-201ENST00000363300 101 ntBASIC1.94□□□□□ -2.1
RTFDC1Q9BY42 Y_RNA.277-201ENST00000364754 102 ntBASIC1.94□□□□□ -2.1
RTFDC1Q9BY42 RN7SKP101-201ENST00000411376 320 ntBASIC1.94□□□□□ -2.1
RTFDC1Q9BY42 SNX2P2-201ENST00000424553 323 ntBASIC1.94□□□□□ -2.1
RTFDC1Q9BY42 AC005908.1-201ENST00000468701 347 ntBASIC1.94□□□□□ -2.1
RTFDC1Q9BY42 RNU4-71P-201ENST00000516258 113 ntBASIC1.94□□□□□ -2.1
RTFDC1Q9BY42 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.94□□□□□ -2.1
RTFDC1Q9BY42 SNORD27-201ENST00000363981 72 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 Y_RNA.262-201ENST00000364641 102 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 RNU6-442P-201ENST00000383968 104 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 RN7SKP51-201ENST00000410781 304 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 COX6CP14-201ENST00000469580 174 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 SNORD45.4-201ENST00000516629 73 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 SUMO2P16-201ENST00000519475 264 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 MIR3122-201ENST00000577243 73 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 MIR4662B-201ENST00000579498 81 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RTFDC1Q9BY42 MIR302D-201ENST00000362275 68 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 Y_RNA.447-201ENST00000384184 113 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 MIR489-201ENST00000384923 84 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 MIR517C-201ENST00000385103 95 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 SNORA67.6-201ENST00000391093 99 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 SNORD58.1-201ENST00000391313 66 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 AC114811.1-201ENST00000507207 168 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 MIR4778-201ENST00000577635 80 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 MIR3937-201ENST00000580135 106 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 MIR6504-201ENST00000613520 61 ntBASIC1.92□□□□□ -2.1
RTFDC1Q9BY42 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 SNORA7.1-201ENST00000363750 139 ntBASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 SNORD1A-201ENST00000364968 72 ntBASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 SNORA2.2-201ENST00000365473 135 ntBASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 MT-TG-201ENST00000387429 68 ntBASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 SNORD11-201ENST00000459124 84 ntBASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 RPL30P7-201ENST00000479312 323 ntBASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 AC100767.1-201ENST00000528178 123 ntBASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 MIR4421-201ENST00000578133 69 ntBASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 AL513534.2-201ENST00000603836 250 ntBASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.91□□□□□ -2.1
RTFDC1Q9BY42 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
RTFDC1Q9BY42 Y_RNA.307-201ENST00000365022 117 ntBASIC1.9□□□□□ -2.11
RTFDC1Q9BY42 RNU6-574P-201ENST00000384265 107 ntBASIC1.9□□□□□ -2.11
RTFDC1Q9BY42 MIR626-201ENST00000385032 94 ntBASIC1.9□□□□□ -2.11
RTFDC1Q9BY42 MIR1323-201ENST00000408090 73 ntBASIC1.9□□□□□ -2.11
RTFDC1Q9BY42 PIGPP3-201ENST00000425307 415 ntBASIC1.9□□□□□ -2.11
RTFDC1Q9BY42 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.9□□□□□ -2.11
RTFDC1Q9BY42 MIR3128-201ENST00000581957 66 ntBASIC1.9□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.188-201ENST00000363952 111 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.292-201ENST00000364904 97 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 RNU4-17P-201ENST00000365598 141 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 RNY3P5-201ENST00000384127 102 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.477-201ENST00000384352 108 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 SNORD38C-201ENST00000384381 69 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 AL451046.2-201ENST00000403074 277 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 AC027119.1-201ENST00000440877 241 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 AC090049.2-201ENST00000550377 109 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 AC008507.4-201ENST00000585464 127 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 AL357312.1-201ENST00000603879 298 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 AP000942.4-201ENST00000604811 241 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 AL021707.8-201ENST00000609428 183 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 uc_338.4-201ENST00000616635 176 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 AL365265.1-201ENST00000621045 234 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms