Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MIR6851-201ENST00000617060 67 ntBASIC-1.74□□□□□ -2.69
ABCA3Q99758 SEPT14P19-203ENST00000633205 211 ntBASIC-1.74□□□□□ -2.69
ABCA3Q99758 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.75□□□□□ -2.69
ABCA3Q99758 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.75□□□□□ -2.69
ABCA3Q99758 MIR517B-201ENST00000385102 67 ntBASIC-1.75□□□□□ -2.69
ABCA3Q99758 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.75□□□□□ -2.69
ABCA3Q99758 FCF1P4-201ENST00000448326 183 ntBASIC-1.75□□□□□ -2.69
ABCA3Q99758 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.75□□□□□ -2.69
ABCA3Q99758 SNORA25.13-201ENST00000516395 103 ntBASIC-1.75□□□□□ -2.69
ABCA3Q99758 AP003072.1-201ENST00000531740 145 ntBASIC-1.75□□□□□ -2.69
ABCA3Q99758 MTND1P24-201ENST00000552175 861 ntBASIC-1.75□□□□□ -2.69
ABCA3Q99758 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.75□□□□□ -2.69
ABCA3Q99758 AC006386.1-201ENST00000619436 415 ntBASIC-1.75□□□□□ -2.69
ABCA3Q99758 SNORD14E-201ENST00000364009 85 ntBASIC-1.76□□□□□ -2.69
ABCA3Q99758 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.76□□□□□ -2.69
ABCA3Q99758 UBL5P4-201ENST00000562584 236 ntBASIC-1.76□□□□□ -2.69
ABCA3Q99758 AC090616.2-202ENST00000584248 222 ntBASIC-1.76□□□□□ -2.69
ABCA3Q99758 SNORD115-44-201ENST00000365391 82 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 U8.15-201ENST00000390947 134 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 MIR8485-201ENST00000401372 91 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 RNA5SP475-201ENST00000410568 110 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 AC074085.1-201ENST00000413598 418 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.77□□□□□ -2.69
ABCA3Q99758 AC126544.2-201ENST00000625174 749 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 RNU6-502P-201ENST00000362419 108 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 SNRPGP14-201ENST00000435400 219 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 AC112204.1-201ENST00000502591 103 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 MIR4775-201ENST00000581168 75 ntBASIC-1.77□□□□□ -2.69
ABCA3Q99758 AL596211.1-201ENST00000569873 2277 ntBASIC-1.78□□□□□ -2.69
ABCA3Q99758 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.78□□□□□ -2.69
ABCA3Q99758 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.78□□□□□ -2.69
ABCA3Q99758 RNU6-268P-201ENST00000364174 107 ntBASIC-1.78□□□□□ -2.69
ABCA3Q99758 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.78□□□□□ -2.69
ABCA3Q99758 AC131281.1-201ENST00000522984 164 ntBASIC-1.78□□□□□ -2.69
ABCA3Q99758 AC005828.6-201ENST00000606610 232 ntBASIC-1.78□□□□□ -2.69
ABCA3Q99758 AC068880.4-201ENST00000623082 495 ntBASIC-1.78□□□□□ -2.69
ABCA3Q99758 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 MIR181B2-201ENST00000385004 89 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 SNORD41.1-201ENST00000391000 69 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 AL445193.1-201ENST00000441183 141 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 USP9YP12-201ENST00000450481 570 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 MTND1P11-201ENST00000456661 876 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 RNU7-188P-201ENST00000517063 64 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 MTND4LP18-201ENST00000526864 291 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 SCOCP1-201ENST00000554676 349 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 MTCO3P23-201ENST00000561363 289 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.79□□□□□ -2.7
ABCA3Q99758 U2.17-201ENST00000611454 95 ntBASIC-1.79□□□□□ -2.7
ABCA3Q99758 SNORD115-32-201ENST00000364079 82 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 RNU6-702P-201ENST00000364982 107 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 MIR1-2-201ENST00000384961 85 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 RNY4P36-201ENST00000391116 96 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 MIR450B-201ENST00000401182 78 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.8□□□□□ -2.7
ABCA3Q99758 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.8□□□□□ -2.7
ABCA3Q99758 MIR4423-201ENST00000580922 80 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.8□□□□□ -2.7
ABCA3Q99758 SNORD114-29-201ENST00000364819 70 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 GMFBP1-201ENST00000467831 427 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 AL354950.2-201ENST00000617939 290 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 AP002371.2-201ENST00000624450 503 ntBASIC-1.8□□□□□ -2.7
ABCA3Q99758 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.81□□□□□ -2.7
ABCA3Q99758 MIR9-2-201ENST00000384838 87 ntBASIC-1.81□□□□□ -2.7
ABCA3Q99758 AP000533.3-201ENST00000447704 118 ntBASIC-1.81□□□□□ -2.7
ABCA3Q99758 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.81□□□□□ -2.7
ABCA3Q99758 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.81□□□□□ -2.7
ABCA3Q99758 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.81□□□□□ -2.7
ABCA3Q99758 AC008507.2-201ENST00000588402 1176 ntBASIC-1.81□□□□□ -2.7
ABCA3Q99758 AC064836.2-201ENST00000609491 462 ntBASIC-1.81□□□□□ -2.7
ABCA3Q99758 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.82□□□□□ -2.7
ABCA3Q99758 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.82□□□□□ -2.7
ABCA3Q99758 SNORD56B-201ENST00000384713 71 ntBASIC-1.82□□□□□ -2.7
ABCA3Q99758 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.82□□□□□ -2.7
ABCA3Q99758 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.82□□□□□ -2.7
ABCA3Q99758 MTATP6P18-201ENST00000417994 673 ntBASIC-1.82□□□□□ -2.7
ABCA3Q99758 RPL30P15-201ENST00000457129 321 ntBASIC-1.82□□□□□ -2.7
ABCA3Q99758 AC010655.3-201ENST00000478818 450 ntBASIC-1.82□□□□□ -2.7
ABCA3Q99758 AC022137.1-201ENST00000483735 151 ntBASIC-1.82□□□□□ -2.7
ABCA3Q99758 snoU83B.1-201ENST00000517136 88 ntBASIC-1.82□□□□□ -2.7
ABCA3Q99758 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.82□□□□□ -2.7
ABCA3Q99758 SNORD74.6-201ENST00000364796 70 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 Y_RNA.472-201ENST00000384322 102 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.83□□□□□ -2.7
ABCA3Q99758 AL031667.1-201ENST00000440222 725 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 SNORD22.1-201ENST00000516331 125 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 AL391834.2-201ENST00000609982 546 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 SNORA20.2-201ENST00000383922 131 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.83□□□□□ -2.7
ABCA3Q99758 MIR147A-201ENST00000385079 72 ntBASIC-1.83□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms